Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
NDUFA1O15239 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
NDUFA1O15239 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
NDUFA1O15239 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC12.53□□□□□ -0.4
NDUFA1O15239 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
NDUFA1O15239 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
NDUFA1O15239 KATNBL1P6-202ENST00000562413 1466 ntBASIC12.53□□□□□ -0.4
NDUFA1O15239 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
NDUFA1O15239 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC12.53□□□□□ -0.4
NDUFA1O15239 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
NDUFA1O15239 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NDUFA1O15239 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NDUFA1O15239 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NDUFA1O15239 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC12.53□□□□□ -0.4
NDUFA1O15239 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NDUFA1O15239 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NDUFA1O15239 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NDUFA1O15239 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
NDUFA1O15239 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NDUFA1O15239 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
NDUFA1O15239 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
NDUFA1O15239 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
NDUFA1O15239 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NDUFA1O15239 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NDUFA1O15239 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
NDUFA1O15239 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC12.53□□□□□ -0.4
NDUFA1O15239 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
NDUFA1O15239 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC12.53□□□□□ -0.4
NDUFA1O15239 TSPY23P-201ENST00000440136 739 ntBASIC12.53□□□□□ -0.4
NDUFA1O15239 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
NDUFA1O15239 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
NDUFA1O15239 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC12.53□□□□□ -0.4
NDUFA1O15239 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC12.53□□□□□ -0.4
NDUFA1O15239 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC12.53□□□□□ -0.4
NDUFA1O15239 UNC93B5-201ENST00000530315 699 ntBASIC12.53□□□□□ -0.4
NDUFA1O15239 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC12.53□□□□□ -0.4
NDUFA1O15239 AC142086.2-201ENST00000569753 217 ntBASIC12.53□□□□□ -0.4
NDUFA1O15239 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
NDUFA1O15239 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC12.53□□□□□ -0.4
NDUFA1O15239 KLF2-202ENST00000592003 564 ntTSL 3 BASIC12.53□□□□□ -0.4
NDUFA1O15239 AC104771.1-201ENST00000603335 964 ntBASIC12.53□□□□□ -0.4
NDUFA1O15239 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC12.53□□□□□ -0.4
NDUFA1O15239 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
NDUFA1O15239 AC080080.1-201ENST00000625121 2420 ntBASIC12.53□□□□□ -0.4
NDUFA1O15239 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC12.53□□□□□ -0.4
NDUFA1O15239 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NDUFA1O15239 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
NDUFA1O15239 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
NDUFA1O15239 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
NDUFA1O15239 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
NDUFA1O15239 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NDUFA1O15239 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
NDUFA1O15239 KRT8P45-201ENST00000414328 1447 ntBASIC12.53□□□□□ -0.4
NDUFA1O15239 TNRC18P3-201ENST00000441896 2691 ntBASIC12.53□□□□□ -0.4
NDUFA1O15239 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
NDUFA1O15239 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
NDUFA1O15239 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NDUFA1O15239 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NDUFA1O15239 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NDUFA1O15239 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC12.53□□□□□ -0.4
NDUFA1O15239 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC12.53□□□□□ -0.4
NDUFA1O15239 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
NDUFA1O15239 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
NDUFA1O15239 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
NDUFA1O15239 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC12.52□□□□□ -0.4
NDUFA1O15239 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
NDUFA1O15239 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
NDUFA1O15239 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC12.52□□□□□ -0.4
NDUFA1O15239 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC12.52□□□□□ -0.4
NDUFA1O15239 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC12.52□□□□□ -0.4
NDUFA1O15239 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC12.52□□□□□ -0.4
NDUFA1O15239 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.4
NDUFA1O15239 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NDUFA1O15239 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC12.52□□□□□ -0.41
NDUFA1O15239 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC12.52□□□□□ -0.41
NDUFA1O15239 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
NDUFA1O15239 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC12.52□□□□□ -0.41
NDUFA1O15239 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
NDUFA1O15239 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
NDUFA1O15239 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NDUFA1O15239 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NDUFA1O15239 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NDUFA1O15239 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
NDUFA1O15239 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NDUFA1O15239 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
NDUFA1O15239 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC12.52□□□□□ -0.41
NDUFA1O15239 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC12.52□□□□□ -0.41
NDUFA1O15239 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
NDUFA1O15239 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC12.52□□□□□ -0.41
NDUFA1O15239 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC12.52□□□□□ -0.41
NDUFA1O15239 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC12.52□□□□□ -0.41
NDUFA1O15239 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC12.52□□□□□ -0.41
NDUFA1O15239 AC068587.9-201ENST00000641814 219 ntBASIC12.52□□□□□ -0.41
NDUFA1O15239 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
NDUFA1O15239 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
NDUFA1O15239 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC12.52□□□□□ -0.41
NDUFA1O15239 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
NDUFA1O15239 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
NDUFA1O15239 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NDUFA1O15239 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms