Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMAD9O15198 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMAD9O15198 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
SMAD9O15198 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMAD9O15198 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMAD9O15198 AC011558.1-201ENST00000623459 338 ntBASIC16.61■□□□□ 0.25
SMAD9O15198 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMAD9O15198 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMAD9O15198 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SMAD9O15198 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMAD9O15198 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SMAD9O15198 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
SMAD9O15198 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SMAD9O15198 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.61■□□□□ 0.25
SMAD9O15198 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMAD9O15198 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMAD9O15198 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SMAD9O15198 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
SMAD9O15198 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMAD9O15198 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.6■□□□□ 0.25
SMAD9O15198 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.6■□□□□ 0.25
SMAD9O15198 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMAD9O15198 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SMAD9O15198 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SMAD9O15198 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SMAD9O15198 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMAD9O15198 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMAD9O15198 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.6■□□□□ 0.25
SMAD9O15198 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.6■□□□□ 0.25
SMAD9O15198 AL499627.1-201ENST00000569373 2188 ntBASIC16.6■□□□□ 0.25
SMAD9O15198 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMAD9O15198 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.6■□□□□ 0.25
SMAD9O15198 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SMAD9O15198 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.6■□□□□ 0.25
SMAD9O15198 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.6■□□□□ 0.25
SMAD9O15198 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.6■□□□□ 0.25
SMAD9O15198 AL441883.1-201ENST00000566170 1045 ntBASIC16.6■□□□□ 0.25
SMAD9O15198 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.6■□□□□ 0.25
SMAD9O15198 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.6■□□□□ 0.25
SMAD9O15198 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
SMAD9O15198 AC140113.3-201ENST00000605663 199 ntBASIC16.6■□□□□ 0.25
SMAD9O15198 AC024243.1-201ENST00000609234 778 ntBASIC16.6■□□□□ 0.25
SMAD9O15198 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.6■□□□□ 0.25
SMAD9O15198 AL031432.5-201ENST00000641059 760 ntBASIC16.6■□□□□ 0.25
SMAD9O15198 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMAD9O15198 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMAD9O15198 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMAD9O15198 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMAD9O15198 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.6■□□□□ 0.25
SMAD9O15198 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMAD9O15198 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.6■□□□□ 0.25
SMAD9O15198 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMAD9O15198 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.6■□□□□ 0.25
SMAD9O15198 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.6■□□□□ 0.25
SMAD9O15198 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SMAD9O15198 KRT8P7-201ENST00000533003 1432 ntBASIC16.6■□□□□ 0.25
SMAD9O15198 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMAD9O15198 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMAD9O15198 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SMAD9O15198 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.6■□□□□ 0.25
SMAD9O15198 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SMAD9O15198 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMAD9O15198 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SMAD9O15198 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMAD9O15198 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMAD9O15198 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SMAD9O15198 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.59■□□□□ 0.25
SMAD9O15198 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
SMAD9O15198 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
SMAD9O15198 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SMAD9O15198 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMAD9O15198 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMAD9O15198 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMAD9O15198 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMAD9O15198 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMAD9O15198 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.59■□□□□ 0.25
SMAD9O15198 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMAD9O15198 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMAD9O15198 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMAD9O15198 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SMAD9O15198 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMAD9O15198 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMAD9O15198 AK4P3-201ENST00000418260 669 ntBASIC16.59■□□□□ 0.25
SMAD9O15198 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
SMAD9O15198 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMAD9O15198 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.59■□□□□ 0.25
SMAD9O15198 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMAD9O15198 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMAD9O15198 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.59■□□□□ 0.25
SMAD9O15198 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.59■□□□□ 0.25
SMAD9O15198 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMAD9O15198 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMAD9O15198 SEC1P-202ENST00000473944 940 ntBASIC16.59■□□□□ 0.25
SMAD9O15198 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.59■□□□□ 0.25
SMAD9O15198 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.59■□□□□ 0.25
SMAD9O15198 KRT18P41-201ENST00000518924 1277 ntBASIC16.59■□□□□ 0.25
SMAD9O15198 GCSHP2-201ENST00000560971 527 ntBASIC16.59■□□□□ 0.25
SMAD9O15198 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMAD9O15198 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMAD9O15198 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms