Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TMEM88BA6NKF7 AC004817.3-201ENST00000602957 2129 ntBASIC21.16■□□□□ 0.98
TMEM88BA6NKF7 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC21.16■□□□□ 0.98
TMEM88BA6NKF7 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
TMEM88BA6NKF7 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TMEM88BA6NKF7 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC21.15■□□□□ 0.98
TMEM88BA6NKF7 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC21.15■□□□□ 0.98
TMEM88BA6NKF7 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TMEM88BA6NKF7 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
TMEM88BA6NKF7 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC21.15■□□□□ 0.98
TMEM88BA6NKF7 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TMEM88BA6NKF7 LINC00565-201ENST00000562710 2331 ntBASIC21.15■□□□□ 0.98
TMEM88BA6NKF7 EDF1-203ENST00000371649 790 ntTSL 2 BASIC21.15■□□□□ 0.98
TMEM88BA6NKF7 DDT-204ENST00000404092 805 ntTSL 3 BASIC21.15■□□□□ 0.98
TMEM88BA6NKF7 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC21.15■□□□□ 0.98
TMEM88BA6NKF7 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC21.15■□□□□ 0.98
TMEM88BA6NKF7 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC21.15■□□□□ 0.98
TMEM88BA6NKF7 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC21.15■□□□□ 0.98
TMEM88BA6NKF7 FAM58CP-201ENST00000435741 640 ntBASIC21.15■□□□□ 0.98
TMEM88BA6NKF7 FAM86GP-201ENST00000448322 971 ntBASIC21.15■□□□□ 0.98
TMEM88BA6NKF7 GAPDHP21-201ENST00000450301 1010 ntBASIC21.15■□□□□ 0.98
TMEM88BA6NKF7 KRT18P41-201ENST00000518924 1277 ntBASIC21.15■□□□□ 0.98
TMEM88BA6NKF7 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC21.15■□□□□ 0.98
TMEM88BA6NKF7 AQP6-203ENST00000551733 849 ntTSL 3 BASIC21.15■□□□□ 0.98
TMEM88BA6NKF7 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
TMEM88BA6NKF7 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC21.15■□□□□ 0.98
TMEM88BA6NKF7 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC21.15■□□□□ 0.98
TMEM88BA6NKF7 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
TMEM88BA6NKF7 AL513210.1-201ENST00000629608 234 ntBASIC21.15■□□□□ 0.98
TMEM88BA6NKF7 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21.15■□□□□ 0.98
TMEM88BA6NKF7 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TMEM88BA6NKF7 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TMEM88BA6NKF7 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
TMEM88BA6NKF7 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TMEM88BA6NKF7 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TMEM88BA6NKF7 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.15■□□□□ 0.98
TMEM88BA6NKF7 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.14■□□□□ 0.98
TMEM88BA6NKF7 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
TMEM88BA6NKF7 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC21.14■□□□□ 0.98
TMEM88BA6NKF7 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TMEM88BA6NKF7 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC21.14■□□□□ 0.98
TMEM88BA6NKF7 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
TMEM88BA6NKF7 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
TMEM88BA6NKF7 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.98
TMEM88BA6NKF7 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC21.14■□□□□ 0.98
TMEM88BA6NKF7 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
TMEM88BA6NKF7 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TMEM88BA6NKF7 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TMEM88BA6NKF7 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
TMEM88BA6NKF7 CCDC74BP1-201ENST00000508880 1123 ntBASIC21.14■□□□□ 0.97
TMEM88BA6NKF7 AC109322.1-201ENST00000524499 1264 ntBASIC21.14■□□□□ 0.97
TMEM88BA6NKF7 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
TMEM88BA6NKF7 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC21.14■□□□□ 0.97
TMEM88BA6NKF7 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC21.14■□□□□ 0.97
TMEM88BA6NKF7 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TMEM88BA6NKF7 AL008721.1-201ENST00000609964 604 ntBASIC21.14■□□□□ 0.97
TMEM88BA6NKF7 AQP6-205ENST00000618286 829 ntTSL 5 BASIC21.14■□□□□ 0.97
TMEM88BA6NKF7 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
TMEM88BA6NKF7 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
TMEM88BA6NKF7 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
TMEM88BA6NKF7 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
TMEM88BA6NKF7 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TMEM88BA6NKF7 PMPCAP1-201ENST00000508114 1576 ntBASIC21.14■□□□□ 0.97
TMEM88BA6NKF7 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.14■□□□□ 0.97
TMEM88BA6NKF7 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TMEM88BA6NKF7 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC21.13■□□□□ 0.97
TMEM88BA6NKF7 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
TMEM88BA6NKF7 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC21.13■□□□□ 0.97
TMEM88BA6NKF7 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TMEM88BA6NKF7 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
TMEM88BA6NKF7 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
TMEM88BA6NKF7 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
TMEM88BA6NKF7 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC21.13■□□□□ 0.97
TMEM88BA6NKF7 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC21.13■□□□□ 0.97
TMEM88BA6NKF7 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC21.13■□□□□ 0.97
TMEM88BA6NKF7 CD63-210ENST00000550776 870 ntTSL 5 BASIC21.13■□□□□ 0.97
TMEM88BA6NKF7 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TMEM88BA6NKF7 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC21.13■□□□□ 0.97
TMEM88BA6NKF7 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC21.13■□□□□ 0.97
TMEM88BA6NKF7 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC21.13■□□□□ 0.97
TMEM88BA6NKF7 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC21.13■□□□□ 0.97
TMEM88BA6NKF7 AL589182.2-201ENST00000619332 1049 ntBASIC21.13■□□□□ 0.97
TMEM88BA6NKF7 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TMEM88BA6NKF7 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TMEM88BA6NKF7 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TMEM88BA6NKF7 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC21.13■□□□□ 0.97
TMEM88BA6NKF7 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TMEM88BA6NKF7 UBQLN4P1-201ENST00000461599 1801 ntBASIC21.13■□□□□ 0.97
TMEM88BA6NKF7 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.13■□□□□ 0.97
TMEM88BA6NKF7 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TMEM88BA6NKF7 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.12■□□□□ 0.97
TMEM88BA6NKF7 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
TMEM88BA6NKF7 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
TMEM88BA6NKF7 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC21.12■□□□□ 0.97
TMEM88BA6NKF7 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TMEM88BA6NKF7 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TMEM88BA6NKF7 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
TMEM88BA6NKF7 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TMEM88BA6NKF7 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TMEM88BA6NKF7 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 10.3 ms