Protein–RNA interactions for Protein: A6NEE1

PLEKHD1, Pleckstrin homology domain-containing family D member 1, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHD1A6NEE1 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC28.05■■■□□ 2.08
PLEKHD1A6NEE1 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC28.05■■■□□ 2.08
PLEKHD1A6NEE1 AC027796.2-201ENST00000575326 344 ntBASIC28.05■■■□□ 2.08
PLEKHD1A6NEE1 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC28.05■■■□□ 2.08
PLEKHD1A6NEE1 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
PLEKHD1A6NEE1 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC28.05■■■□□ 2.08
PLEKHD1A6NEE1 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC28.04■■■□□ 2.08
PLEKHD1A6NEE1 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
PLEKHD1A6NEE1 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
PLEKHD1A6NEE1 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC28.04■■■□□ 2.08
PLEKHD1A6NEE1 AL161938.1-201ENST00000569833 2180 ntBASIC28.04■■■□□ 2.08
PLEKHD1A6NEE1 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
PLEKHD1A6NEE1 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
PLEKHD1A6NEE1 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC28.04■■■□□ 2.08
PLEKHD1A6NEE1 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC28.04■■■□□ 2.08
PLEKHD1A6NEE1 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC28.04■■■□□ 2.08
PLEKHD1A6NEE1 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
PLEKHD1A6NEE1 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC28.04■■■□□ 2.08
PLEKHD1A6NEE1 RNF151-202ENST00000569210 853 ntTSL 2 BASIC28.04■■■□□ 2.08
PLEKHD1A6NEE1 AC079781.4-201ENST00000641908 219 ntBASIC28.04■■■□□ 2.08
PLEKHD1A6NEE1 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC28.04■■■□□ 2.08
PLEKHD1A6NEE1 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC28.04■■■□□ 2.08
PLEKHD1A6NEE1 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
PLEKHD1A6NEE1 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
PLEKHD1A6NEE1 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
PLEKHD1A6NEE1 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
PLEKHD1A6NEE1 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC28.04■■■□□ 2.08
PLEKHD1A6NEE1 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC28.04■■■□□ 2.08
PLEKHD1A6NEE1 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
PLEKHD1A6NEE1 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC28.03■■■□□ 2.08
PLEKHD1A6NEE1 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC28.03■■■□□ 2.08
PLEKHD1A6NEE1 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC28.03■■■□□ 2.08
PLEKHD1A6NEE1 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC28.03■■■□□ 2.08
PLEKHD1A6NEE1 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
PLEKHD1A6NEE1 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
PLEKHD1A6NEE1 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC28.03■■■□□ 2.08
PLEKHD1A6NEE1 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
PLEKHD1A6NEE1 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
PLEKHD1A6NEE1 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
PLEKHD1A6NEE1 LAGE3P1-201ENST00000425356 484 ntBASIC28.03■■■□□ 2.08
PLEKHD1A6NEE1 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC28.03■■■□□ 2.08
PLEKHD1A6NEE1 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC28.03■■■□□ 2.08
PLEKHD1A6NEE1 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC28.03■■■□□ 2.08
PLEKHD1A6NEE1 AC134684.3-201ENST00000641758 218 ntBASIC28.03■■■□□ 2.08
PLEKHD1A6NEE1 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
PLEKHD1A6NEE1 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
PLEKHD1A6NEE1 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
PLEKHD1A6NEE1 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC28.03■■■□□ 2.08
PLEKHD1A6NEE1 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC28.03■■■□□ 2.08
PLEKHD1A6NEE1 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC28.03■■■□□ 2.08
PLEKHD1A6NEE1 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
PLEKHD1A6NEE1 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC28.02■■■□□ 2.08
PLEKHD1A6NEE1 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC28.02■■■□□ 2.08
PLEKHD1A6NEE1 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC28.02■■■□□ 2.08
PLEKHD1A6NEE1 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC28.02■■■□□ 2.08
PLEKHD1A6NEE1 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC28.02■■■□□ 2.08
PLEKHD1A6NEE1 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC28.02■■■□□ 2.08
PLEKHD1A6NEE1 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC28.02■■■□□ 2.08
PLEKHD1A6NEE1 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
PLEKHD1A6NEE1 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
PLEKHD1A6NEE1 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
PLEKHD1A6NEE1 AC009947.1-201ENST00000444350 727 ntBASIC28.02■■■□□ 2.08
PLEKHD1A6NEE1 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC28.02■■■□□ 2.08
PLEKHD1A6NEE1 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC28.02■■■□□ 2.08
PLEKHD1A6NEE1 RPS29-206ENST00000557111 488 ntTSL 2 BASIC28.02■■■□□ 2.08
PLEKHD1A6NEE1 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC28.02■■■□□ 2.08
PLEKHD1A6NEE1 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC28.02■■■□□ 2.08
PLEKHD1A6NEE1 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC28.02■■■□□ 2.08
PLEKHD1A6NEE1 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
PLEKHD1A6NEE1 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC28.02■■■□□ 2.08
PLEKHD1A6NEE1 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
PLEKHD1A6NEE1 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC28.02■■■□□ 2.08
PLEKHD1A6NEE1 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
PLEKHD1A6NEE1 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
PLEKHD1A6NEE1 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC28.02■■■□□ 2.08
PLEKHD1A6NEE1 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC28.01■■■□□ 2.08
PLEKHD1A6NEE1 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC28.01■■■□□ 2.08
PLEKHD1A6NEE1 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC28.01■■■□□ 2.08
PLEKHD1A6NEE1 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC28.01■■■□□ 2.07
PLEKHD1A6NEE1 AC007967.2-201ENST00000432613 625 ntBASIC28.01■■■□□ 2.07
PLEKHD1A6NEE1 MSRA-206ENST00000521209 814 ntTSL 3 BASIC28.01■■■□□ 2.07
PLEKHD1A6NEE1 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC28.01■■■□□ 2.07
PLEKHD1A6NEE1 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
PLEKHD1A6NEE1 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC28.01■■■□□ 2.07
PLEKHD1A6NEE1 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
PLEKHD1A6NEE1 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC28.01■■■□□ 2.07
PLEKHD1A6NEE1 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC28.01■■■□□ 2.07
PLEKHD1A6NEE1 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC28.01■■■□□ 2.07
PLEKHD1A6NEE1 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC28.01■■■□□ 2.07
PLEKHD1A6NEE1 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
PLEKHD1A6NEE1 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC28■■■□□ 2.07
PLEKHD1A6NEE1 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC28■■■□□ 2.07
PLEKHD1A6NEE1 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC28■■■□□ 2.07
PLEKHD1A6NEE1 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
PLEKHD1A6NEE1 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
PLEKHD1A6NEE1 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC28■■■□□ 2.07
PLEKHD1A6NEE1 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
PLEKHD1A6NEE1 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC28■■■□□ 2.07
PLEKHD1A6NEE1 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC28■■■□□ 2.07
PLEKHD1A6NEE1 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms