Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM49BA6NDI0 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
TRIM49BA6NDI0 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM49BA6NDI0 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM49BA6NDI0 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM49BA6NDI0 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.17■□□□□ 0.82
TRIM49BA6NDI0 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM49BA6NDI0 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM49BA6NDI0 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM49BA6NDI0 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM49BA6NDI0 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM49BA6NDI0 FLJ13224-201ENST00000313737 1514 ntBASIC20.17■□□□□ 0.82
TRIM49BA6NDI0 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM49BA6NDI0 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC20.17■□□□□ 0.82
TRIM49BA6NDI0 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM49BA6NDI0 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM49BA6NDI0 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC20.16■□□□□ 0.82
TRIM49BA6NDI0 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM49BA6NDI0 AL024508.2-201ENST00000607749 1894 ntBASIC20.16■□□□□ 0.82
TRIM49BA6NDI0 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC20.16■□□□□ 0.82
TRIM49BA6NDI0 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM49BA6NDI0 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM49BA6NDI0 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
TRIM49BA6NDI0 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM49BA6NDI0 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM49BA6NDI0 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
TRIM49BA6NDI0 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM49BA6NDI0 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM49BA6NDI0 ECEL1P2-202ENST00000465689 757 ntBASIC20.16■□□□□ 0.82
TRIM49BA6NDI0 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC20.16■□□□□ 0.82
TRIM49BA6NDI0 NT5C-210ENST00000582160 860 ntTSL 2 BASIC20.16■□□□□ 0.82
TRIM49BA6NDI0 FAM87A-204ENST00000613235 858 ntBASIC20.16■□□□□ 0.82
TRIM49BA6NDI0 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
TRIM49BA6NDI0 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM49BA6NDI0 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM49BA6NDI0 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM49BA6NDI0 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC20.16■□□□□ 0.82
TRIM49BA6NDI0 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM49BA6NDI0 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM49BA6NDI0 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
TRIM49BA6NDI0 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM49BA6NDI0 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM49BA6NDI0 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC20.15■□□□□ 0.82
TRIM49BA6NDI0 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM49BA6NDI0 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM49BA6NDI0 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM49BA6NDI0 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM49BA6NDI0 MMP23A-201ENST00000234610 1017 ntBASIC20.15■□□□□ 0.82
TRIM49BA6NDI0 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM49BA6NDI0 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM49BA6NDI0 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.15■□□□□ 0.82
TRIM49BA6NDI0 AC009947.2-201ENST00000444014 672 ntBASIC20.15■□□□□ 0.82
TRIM49BA6NDI0 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.15■□□□□ 0.82
TRIM49BA6NDI0 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC20.15■□□□□ 0.82
TRIM49BA6NDI0 ETFA-216ENST00000560726 942 ntTSL 3 BASIC20.15■□□□□ 0.82
TRIM49BA6NDI0 NAPSB-206ENST00000562112 1266 ntBASIC20.15■□□□□ 0.82
TRIM49BA6NDI0 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
TRIM49BA6NDI0 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM49BA6NDI0 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM49BA6NDI0 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC20.15■□□□□ 0.82
TRIM49BA6NDI0 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC20.15■□□□□ 0.82
TRIM49BA6NDI0 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM49BA6NDI0 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM49BA6NDI0 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM49BA6NDI0 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM49BA6NDI0 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM49BA6NDI0 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM49BA6NDI0 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM49BA6NDI0 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC20.14■□□□□ 0.82
TRIM49BA6NDI0 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.82
TRIM49BA6NDI0 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
TRIM49BA6NDI0 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC20.14■□□□□ 0.81
TRIM49BA6NDI0 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
TRIM49BA6NDI0 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM49BA6NDI0 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM49BA6NDI0 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM49BA6NDI0 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM49BA6NDI0 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
TRIM49BA6NDI0 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM49BA6NDI0 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
TRIM49BA6NDI0 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.14■□□□□ 0.81
TRIM49BA6NDI0 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM49BA6NDI0 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.14■□□□□ 0.81
TRIM49BA6NDI0 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
TRIM49BA6NDI0 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC20.14■□□□□ 0.81
TRIM49BA6NDI0 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC20.14■□□□□ 0.81
TRIM49BA6NDI0 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC20.14■□□□□ 0.81
TRIM49BA6NDI0 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.14■□□□□ 0.81
TRIM49BA6NDI0 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM49BA6NDI0 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM49BA6NDI0 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM49BA6NDI0 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM49BA6NDI0 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM49BA6NDI0 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM49BA6NDI0 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM49BA6NDI0 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM49BA6NDI0 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM49BA6NDI0 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM49BA6NDI0 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM49BA6NDI0 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms