Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC26.17■■□□□ 1.78
CCDC144AA2RUR9 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
CCDC144AA2RUR9 AC011467.2-201ENST00000598425 242 ntBASIC26.17■■□□□ 1.78
CCDC144AA2RUR9 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CCDC144AA2RUR9 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
CCDC144AA2RUR9 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CCDC144AA2RUR9 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC26.17■■□□□ 1.78
CCDC144AA2RUR9 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CCDC144AA2RUR9 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC26.17■■□□□ 1.78
CCDC144AA2RUR9 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC26.17■■□□□ 1.78
CCDC144AA2RUR9 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC26.17■■□□□ 1.78
CCDC144AA2RUR9 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
CCDC144AA2RUR9 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
CCDC144AA2RUR9 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CCDC144AA2RUR9 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CCDC144AA2RUR9 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CCDC144AA2RUR9 AC009533.2-201ENST00000543664 586 ntBASIC26.16■■□□□ 1.78
CCDC144AA2RUR9 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC26.16■■□□□ 1.78
CCDC144AA2RUR9 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC26.16■■□□□ 1.78
CCDC144AA2RUR9 AC073592.3-201ENST00000625118 1834 ntBASIC26.16■■□□□ 1.78
CCDC144AA2RUR9 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC26.16■■□□□ 1.78
CCDC144AA2RUR9 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC26.16■■□□□ 1.78
CCDC144AA2RUR9 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC26.16■■□□□ 1.78
CCDC144AA2RUR9 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CCDC144AA2RUR9 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
CCDC144AA2RUR9 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
CCDC144AA2RUR9 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
CCDC144AA2RUR9 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CCDC144AA2RUR9 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC26.15■■□□□ 1.78
CCDC144AA2RUR9 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
CCDC144AA2RUR9 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
CCDC144AA2RUR9 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CCDC144AA2RUR9 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC26.15■■□□□ 1.78
CCDC144AA2RUR9 AC112698.1-201ENST00000510299 916 ntBASIC26.15■■□□□ 1.78
CCDC144AA2RUR9 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC26.15■■□□□ 1.78
CCDC144AA2RUR9 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
CCDC144AA2RUR9 GZMM-202ENST00000592501 941 ntTSL 3 BASIC26.15■■□□□ 1.78
CCDC144AA2RUR9 AC008608.2-201ENST00000606089 416 ntBASIC26.15■■□□□ 1.78
CCDC144AA2RUR9 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC26.15■■□□□ 1.78
CCDC144AA2RUR9 INTS4P1-201ENST00000438455 1935 ntBASIC26.15■■□□□ 1.78
CCDC144AA2RUR9 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC26.15■■□□□ 1.78
CCDC144AA2RUR9 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
CCDC144AA2RUR9 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC26.15■■□□□ 1.78
CCDC144AA2RUR9 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CCDC144AA2RUR9 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
CCDC144AA2RUR9 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC26.15■■□□□ 1.78
CCDC144AA2RUR9 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CCDC144AA2RUR9 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CCDC144AA2RUR9 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC26.15■■□□□ 1.78
CCDC144AA2RUR9 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC26.15■■□□□ 1.78
CCDC144AA2RUR9 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC26.15■■□□□ 1.78
CCDC144AA2RUR9 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC26.15■■□□□ 1.78
CCDC144AA2RUR9 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
CCDC144AA2RUR9 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC26.14■■□□□ 1.78
CCDC144AA2RUR9 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
CCDC144AA2RUR9 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
CCDC144AA2RUR9 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC26.14■■□□□ 1.78
CCDC144AA2RUR9 PPIE-208ENST00000470213 927 ntTSL 3 BASIC26.14■■□□□ 1.78
CCDC144AA2RUR9 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.78
CCDC144AA2RUR9 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC26.14■■□□□ 1.78
CCDC144AA2RUR9 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
CCDC144AA2RUR9 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC26.14■■□□□ 1.78
CCDC144AA2RUR9 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.78
CCDC144AA2RUR9 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.78
CCDC144AA2RUR9 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC26.14■■□□□ 1.78
CCDC144AA2RUR9 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
CCDC144AA2RUR9 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
CCDC144AA2RUR9 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.78
CCDC144AA2RUR9 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.78
CCDC144AA2RUR9 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.78
CCDC144AA2RUR9 HLA-A-201ENST00000376802 1334 ntBASIC26.14■■□□□ 1.77
CCDC144AA2RUR9 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
CCDC144AA2RUR9 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC26.14■■□□□ 1.77
CCDC144AA2RUR9 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
CCDC144AA2RUR9 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
CCDC144AA2RUR9 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
CCDC144AA2RUR9 RNA5SP419-201ENST00000515908 135 ntBASIC26.14■■□□□ 1.77
CCDC144AA2RUR9 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC26.14■■□□□ 1.77
CCDC144AA2RUR9 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC26.14■■□□□ 1.77
CCDC144AA2RUR9 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CCDC144AA2RUR9 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC26.13■■□□□ 1.77
CCDC144AA2RUR9 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC26.13■■□□□ 1.77
CCDC144AA2RUR9 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC26.13■■□□□ 1.77
CCDC144AA2RUR9 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC26.13■■□□□ 1.77
CCDC144AA2RUR9 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CCDC144AA2RUR9 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
CCDC144AA2RUR9 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC26.13■■□□□ 1.77
CCDC144AA2RUR9 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
CCDC144AA2RUR9 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
CCDC144AA2RUR9 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CCDC144AA2RUR9 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CCDC144AA2RUR9 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CCDC144AA2RUR9 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
CCDC144AA2RUR9 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC26.13■■□□□ 1.77
CCDC144AA2RUR9 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC26.13■■□□□ 1.77
CCDC144AA2RUR9 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC26.13■■□□□ 1.77
CCDC144AA2RUR9 AP001269.4-201ENST00000609611 512 ntBASIC26.13■■□□□ 1.77
CCDC144AA2RUR9 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC26.13■■□□□ 1.77
CCDC144AA2RUR9 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
CCDC144AA2RUR9 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms