Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 AC080080.1-201ENST00000625121 2420 ntBASIC17.13■□□□□ 0.33
TRBV5-3A0A0A0MS03 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV5-3A0A0A0MS03 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV5-3A0A0A0MS03 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV5-3A0A0A0MS03 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.13■□□□□ 0.33
TRBV5-3A0A0A0MS03 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV5-3A0A0A0MS03 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV5-3A0A0A0MS03 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TRBV5-3A0A0A0MS03 AC009053.2-201ENST00000563701 2365 ntBASIC17.13■□□□□ 0.33
TRBV5-3A0A0A0MS03 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
TRBV5-3A0A0A0MS03 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
TRBV5-3A0A0A0MS03 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.12■□□□□ 0.33
TRBV5-3A0A0A0MS03 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV5-3A0A0A0MS03 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV5-3A0A0A0MS03 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV5-3A0A0A0MS03 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV5-3A0A0A0MS03 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV5-3A0A0A0MS03 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TRBV5-3A0A0A0MS03 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV5-3A0A0A0MS03 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV5-3A0A0A0MS03 PRORSD1P-201ENST00000295112 541 ntBASIC17.12■□□□□ 0.33
TRBV5-3A0A0A0MS03 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.12■□□□□ 0.33
TRBV5-3A0A0A0MS03 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.12■□□□□ 0.33
TRBV5-3A0A0A0MS03 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.12■□□□□ 0.33
TRBV5-3A0A0A0MS03 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.12■□□□□ 0.33
TRBV5-3A0A0A0MS03 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.12■□□□□ 0.33
TRBV5-3A0A0A0MS03 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.12■□□□□ 0.33
TRBV5-3A0A0A0MS03 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TRBV5-3A0A0A0MS03 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV5-3A0A0A0MS03 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.12■□□□□ 0.33
TRBV5-3A0A0A0MS03 AC132938.6-201ENST00000623828 1655 ntBASIC17.12■□□□□ 0.33
TRBV5-3A0A0A0MS03 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV5-3A0A0A0MS03 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV5-3A0A0A0MS03 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.12■□□□□ 0.33
TRBV5-3A0A0A0MS03 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV5-3A0A0A0MS03 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TRBV5-3A0A0A0MS03 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV5-3A0A0A0MS03 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.12■□□□□ 0.33
TRBV5-3A0A0A0MS03 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV5-3A0A0A0MS03 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.12■□□□□ 0.33
TRBV5-3A0A0A0MS03 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.12■□□□□ 0.33
TRBV5-3A0A0A0MS03 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV5-3A0A0A0MS03 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV5-3A0A0A0MS03 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV5-3A0A0A0MS03 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV5-3A0A0A0MS03 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
TRBV5-3A0A0A0MS03 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV5-3A0A0A0MS03 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV5-3A0A0A0MS03 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV5-3A0A0A0MS03 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV5-3A0A0A0MS03 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV5-3A0A0A0MS03 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TRBV5-3A0A0A0MS03 SLC25A1P2-201ENST00000430693 912 ntBASIC17.11■□□□□ 0.33
TRBV5-3A0A0A0MS03 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.11■□□□□ 0.33
TRBV5-3A0A0A0MS03 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.11■□□□□ 0.33
TRBV5-3A0A0A0MS03 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.11■□□□□ 0.33
TRBV5-3A0A0A0MS03 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.11■□□□□ 0.33
TRBV5-3A0A0A0MS03 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV5-3A0A0A0MS03 AL049637.2-201ENST00000641778 930 ntBASIC17.11■□□□□ 0.33
TRBV5-3A0A0A0MS03 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
TRBV5-3A0A0A0MS03 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
TRBV5-3A0A0A0MS03 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV5-3A0A0A0MS03 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV5-3A0A0A0MS03 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TRBV5-3A0A0A0MS03 AC092338.2-201ENST00000568827 1415 ntBASIC17.11■□□□□ 0.33
TRBV5-3A0A0A0MS03 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV5-3A0A0A0MS03 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV5-3A0A0A0MS03 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.11■□□□□ 0.33
TRBV5-3A0A0A0MS03 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV5-3A0A0A0MS03 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV5-3A0A0A0MS03 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.11■□□□□ 0.33
TRBV5-3A0A0A0MS03 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV5-3A0A0A0MS03 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TRBV5-3A0A0A0MS03 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV5-3A0A0A0MS03 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV5-3A0A0A0MS03 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV5-3A0A0A0MS03 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV5-3A0A0A0MS03 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV5-3A0A0A0MS03 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV5-3A0A0A0MS03 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV5-3A0A0A0MS03 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.1■□□□□ 0.33
TRBV5-3A0A0A0MS03 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV5-3A0A0A0MS03 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.1■□□□□ 0.33
TRBV5-3A0A0A0MS03 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.1■□□□□ 0.33
TRBV5-3A0A0A0MS03 AC098590.1-201ENST00000468126 897 ntBASIC17.1■□□□□ 0.33
TRBV5-3A0A0A0MS03 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV5-3A0A0A0MS03 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.1■□□□□ 0.33
TRBV5-3A0A0A0MS03 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.1■□□□□ 0.33
TRBV5-3A0A0A0MS03 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.1■□□□□ 0.33
TRBV5-3A0A0A0MS03 AC009065.1-201ENST00000564055 1225 ntBASIC17.1■□□□□ 0.33
TRBV5-3A0A0A0MS03 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.1■□□□□ 0.33
TRBV5-3A0A0A0MS03 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.1■□□□□ 0.33
TRBV5-3A0A0A0MS03 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV5-3A0A0A0MS03 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV5-3A0A0A0MS03 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.1■□□□□ 0.33
TRBV5-3A0A0A0MS03 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
TRBV5-3A0A0A0MS03 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV5-3A0A0A0MS03 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
TRBV5-3A0A0A0MS03 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV5-3A0A0A0MS03 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms