Protein–RNA interactions for Protein: A0A087WT02

TRAV9-2, T-cell receptor alpha variable 9-2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-2A0A087WT02 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC13.66□□□□□ -0.22
TRAV9-2A0A087WT02 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV9-2A0A087WT02 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV9-2A0A087WT02 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV9-2A0A087WT02 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV9-2A0A087WT02 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV9-2A0A087WT02 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV9-2A0A087WT02 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV9-2A0A087WT02 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC13.66□□□□□ -0.22
TRAV9-2A0A087WT02 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV9-2A0A087WT02 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV9-2A0A087WT02 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV9-2A0A087WT02 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV9-2A0A087WT02 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV9-2A0A087WT02 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV9-2A0A087WT02 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV9-2A0A087WT02 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV9-2A0A087WT02 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC13.66□□□□□ -0.22
TRAV9-2A0A087WT02 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV9-2A0A087WT02 MMAB-206ENST00000540016 945 ntTSL 3 BASIC13.66□□□□□ -0.22
TRAV9-2A0A087WT02 AC005829.2-201ENST00000571422 1056 ntBASIC13.66□□□□□ -0.22
TRAV9-2A0A087WT02 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV9-2A0A087WT02 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV9-2A0A087WT02 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV9-2A0A087WT02 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV9-2A0A087WT02 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV9-2A0A087WT02 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV9-2A0A087WT02 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV9-2A0A087WT02 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC13.66□□□□□ -0.22
TRAV9-2A0A087WT02 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
TRAV9-2A0A087WT02 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
TRAV9-2A0A087WT02 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC13.66□□□□□ -0.22
TRAV9-2A0A087WT02 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
TRAV9-2A0A087WT02 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV9-2A0A087WT02 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC13.66□□□□□ -0.22
TRAV9-2A0A087WT02 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
TRAV9-2A0A087WT02 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV9-2A0A087WT02 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
TRAV9-2A0A087WT02 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV9-2A0A087WT02 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV9-2A0A087WT02 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV9-2A0A087WT02 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV9-2A0A087WT02 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV9-2A0A087WT02 IRX1P1-201ENST00000438849 1838 ntBASIC13.65□□□□□ -0.22
TRAV9-2A0A087WT02 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV9-2A0A087WT02 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV9-2A0A087WT02 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV9-2A0A087WT02 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV9-2A0A087WT02 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV9-2A0A087WT02 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV9-2A0A087WT02 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV9-2A0A087WT02 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV9-2A0A087WT02 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV9-2A0A087WT02 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV9-2A0A087WT02 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC13.65□□□□□ -0.22
TRAV9-2A0A087WT02 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC13.65□□□□□ -0.22
TRAV9-2A0A087WT02 MAX-217ENST00000557277 728 ntTSL 3 BASIC13.65□□□□□ -0.22
TRAV9-2A0A087WT02 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC13.65□□□□□ -0.22
TRAV9-2A0A087WT02 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV9-2A0A087WT02 ITM2C-210ENST00000620962 501 ntBASIC13.65□□□□□ -0.22
TRAV9-2A0A087WT02 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV9-2A0A087WT02 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV9-2A0A087WT02 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV9-2A0A087WT02 NARF-204ENST00000390006 1766 ntTSL 2 BASIC13.65□□□□□ -0.22
TRAV9-2A0A087WT02 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV9-2A0A087WT02 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV9-2A0A087WT02 NFIC-211ENST00000641145 8399 ntBASIC13.65□□□□□ -0.22
TRAV9-2A0A087WT02 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV9-2A0A087WT02 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV9-2A0A087WT02 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV9-2A0A087WT02 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC13.65□□□□□ -0.22
TRAV9-2A0A087WT02 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
TRAV9-2A0A087WT02 KRT8P20-201ENST00000423953 1409 ntBASIC13.64□□□□□ -0.23
TRAV9-2A0A087WT02 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
TRAV9-2A0A087WT02 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV9-2A0A087WT02 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC13.64□□□□□ -0.23
TRAV9-2A0A087WT02 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV9-2A0A087WT02 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV9-2A0A087WT02 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV9-2A0A087WT02 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC13.64□□□□□ -0.23
TRAV9-2A0A087WT02 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
TRAV9-2A0A087WT02 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC13.64□□□□□ -0.23
TRAV9-2A0A087WT02 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV9-2A0A087WT02 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC13.64□□□□□ -0.23
TRAV9-2A0A087WT02 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC13.64□□□□□ -0.23
TRAV9-2A0A087WT02 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
TRAV9-2A0A087WT02 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV9-2A0A087WT02 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
TRAV9-2A0A087WT02 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV9-2A0A087WT02 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
TRAV9-2A0A087WT02 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV9-2A0A087WT02 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV9-2A0A087WT02 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV9-2A0A087WT02 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV9-2A0A087WT02 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC13.64□□□□□ -0.23
TRAV9-2A0A087WT02 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV9-2A0A087WT02 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC13.64□□□□□ -0.23
TRAV9-2A0A087WT02 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV9-2A0A087WT02 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV9-2A0A087WT02 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms