Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
RAI2Q9Y5P3 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.52■□□□□ 0.56
RAI2Q9Y5P3 HYMAI.1-201ENST00000620949 238 ntBASIC18.52■□□□□ 0.56
RAI2Q9Y5P3 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.52■□□□□ 0.56
RAI2Q9Y5P3 AL121956.5-201ENST00000625261 221 ntBASIC18.52■□□□□ 0.56
RAI2Q9Y5P3 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RAI2Q9Y5P3 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.52■□□□□ 0.56
RAI2Q9Y5P3 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
RAI2Q9Y5P3 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.52■□□□□ 0.56
RAI2Q9Y5P3 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RAI2Q9Y5P3 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RAI2Q9Y5P3 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
RAI2Q9Y5P3 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
RAI2Q9Y5P3 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RAI2Q9Y5P3 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RAI2Q9Y5P3 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.52■□□□□ 0.55
RAI2Q9Y5P3 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RAI2Q9Y5P3 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
RAI2Q9Y5P3 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RAI2Q9Y5P3 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.52■□□□□ 0.55
RAI2Q9Y5P3 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RAI2Q9Y5P3 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
RAI2Q9Y5P3 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.55
RAI2Q9Y5P3 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.55
RAI2Q9Y5P3 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.52■□□□□ 0.55
RAI2Q9Y5P3 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RAI2Q9Y5P3 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
RAI2Q9Y5P3 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
RAI2Q9Y5P3 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAI2Q9Y5P3 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RAI2Q9Y5P3 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RAI2Q9Y5P3 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.51■□□□□ 0.55
RAI2Q9Y5P3 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RAI2Q9Y5P3 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.51■□□□□ 0.55
RAI2Q9Y5P3 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAI2Q9Y5P3 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RAI2Q9Y5P3 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAI2Q9Y5P3 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
RAI2Q9Y5P3 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.51■□□□□ 0.55
RAI2Q9Y5P3 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAI2Q9Y5P3 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.51■□□□□ 0.55
RAI2Q9Y5P3 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
RAI2Q9Y5P3 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.51■□□□□ 0.55
RAI2Q9Y5P3 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAI2Q9Y5P3 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.51■□□□□ 0.55
RAI2Q9Y5P3 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAI2Q9Y5P3 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.51■□□□□ 0.55
RAI2Q9Y5P3 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.51■□□□□ 0.55
RAI2Q9Y5P3 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.51■□□□□ 0.55
RAI2Q9Y5P3 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAI2Q9Y5P3 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAI2Q9Y5P3 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.51■□□□□ 0.55
RAI2Q9Y5P3 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAI2Q9Y5P3 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.51■□□□□ 0.55
RAI2Q9Y5P3 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.51■□□□□ 0.55
RAI2Q9Y5P3 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RAI2Q9Y5P3 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.51■□□□□ 0.55
RAI2Q9Y5P3 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.51■□□□□ 0.55
RAI2Q9Y5P3 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAI2Q9Y5P3 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RAI2Q9Y5P3 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAI2Q9Y5P3 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAI2Q9Y5P3 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.5■□□□□ 0.55
RAI2Q9Y5P3 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RAI2Q9Y5P3 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RAI2Q9Y5P3 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAI2Q9Y5P3 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAI2Q9Y5P3 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.5■□□□□ 0.55
RAI2Q9Y5P3 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
RAI2Q9Y5P3 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.5■□□□□ 0.55
RAI2Q9Y5P3 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAI2Q9Y5P3 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAI2Q9Y5P3 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.5■□□□□ 0.55
RAI2Q9Y5P3 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAI2Q9Y5P3 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.5■□□□□ 0.55
RAI2Q9Y5P3 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RAI2Q9Y5P3 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
RAI2Q9Y5P3 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.5■□□□□ 0.55
RAI2Q9Y5P3 AL671277.2-201ENST00000458060 996 ntBASIC18.5■□□□□ 0.55
RAI2Q9Y5P3 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.5■□□□□ 0.55
RAI2Q9Y5P3 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.5■□□□□ 0.55
RAI2Q9Y5P3 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.5■□□□□ 0.55
RAI2Q9Y5P3 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.5■□□□□ 0.55
RAI2Q9Y5P3 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAI2Q9Y5P3 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAI2Q9Y5P3 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAI2Q9Y5P3 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RAI2Q9Y5P3 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAI2Q9Y5P3 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
RAI2Q9Y5P3 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
RAI2Q9Y5P3 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.49■□□□□ 0.55
RAI2Q9Y5P3 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
RAI2Q9Y5P3 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
RAI2Q9Y5P3 LINC01311-201ENST00000565162 1445 ntBASIC18.49■□□□□ 0.55
RAI2Q9Y5P3 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.49■□□□□ 0.55
RAI2Q9Y5P3 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.49■□□□□ 0.55
RAI2Q9Y5P3 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RAI2Q9Y5P3 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.49■□□□□ 0.55
RAI2Q9Y5P3 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAI2Q9Y5P3 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms