Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC27.12■■□□□ 1.93
SHANK2Q9UPX8 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC27.12■■□□□ 1.93
SHANK2Q9UPX8 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC27.12■■□□□ 1.93
SHANK2Q9UPX8 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC27.12■■□□□ 1.93
SHANK2Q9UPX8 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
SHANK2Q9UPX8 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
SHANK2Q9UPX8 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC27.11■■□□□ 1.93
SHANK2Q9UPX8 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
SHANK2Q9UPX8 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC27.11■■□□□ 1.93
SHANK2Q9UPX8 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC27.11■■□□□ 1.93
SHANK2Q9UPX8 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
SHANK2Q9UPX8 BX842568.4-201ENST00000421222 227 ntBASIC27.11■■□□□ 1.93
SHANK2Q9UPX8 ABCD1P5-201ENST00000445663 754 ntBASIC27.11■■□□□ 1.93
SHANK2Q9UPX8 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC27.11■■□□□ 1.93
SHANK2Q9UPX8 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC27.11■■□□□ 1.93
SHANK2Q9UPX8 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC27.11■■□□□ 1.93
SHANK2Q9UPX8 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
SHANK2Q9UPX8 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
SHANK2Q9UPX8 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC27.1■■□□□ 1.93
SHANK2Q9UPX8 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
SHANK2Q9UPX8 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
SHANK2Q9UPX8 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
SHANK2Q9UPX8 SART3-203ENST00000546611 1184 ntBASIC27.1■■□□□ 1.93
SHANK2Q9UPX8 LITAF-211ENST00000572255 516 ntTSL 4 BASIC27.1■■□□□ 1.93
SHANK2Q9UPX8 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC27.1■■□□□ 1.93
SHANK2Q9UPX8 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC27.1■■□□□ 1.93
SHANK2Q9UPX8 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC27.1■■□□□ 1.93
SHANK2Q9UPX8 FAM215A-202ENST00000632077 792 ntBASIC27.1■■□□□ 1.93
SHANK2Q9UPX8 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC27.1■■□□□ 1.93
SHANK2Q9UPX8 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
SHANK2Q9UPX8 AC093010.1-201ENST00000473625 1624 ntBASIC27.1■■□□□ 1.93
SHANK2Q9UPX8 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC27.09■■□□□ 1.93
SHANK2Q9UPX8 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
SHANK2Q9UPX8 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
SHANK2Q9UPX8 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
SHANK2Q9UPX8 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC27.09■■□□□ 1.93
SHANK2Q9UPX8 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC27.09■■□□□ 1.93
SHANK2Q9UPX8 HNRNPDP1-201ENST00000439535 754 ntBASIC27.09■■□□□ 1.93
SHANK2Q9UPX8 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC27.09■■□□□ 1.93
SHANK2Q9UPX8 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC27.09■■□□□ 1.93
SHANK2Q9UPX8 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
SHANK2Q9UPX8 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC27.09■■□□□ 1.93
SHANK2Q9UPX8 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC27.09■■□□□ 1.93
SHANK2Q9UPX8 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC27.09■■□□□ 1.93
SHANK2Q9UPX8 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC27.09■■□□□ 1.93
SHANK2Q9UPX8 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC27.09■■□□□ 1.93
SHANK2Q9UPX8 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC27.09■■□□□ 1.93
SHANK2Q9UPX8 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
SHANK2Q9UPX8 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
SHANK2Q9UPX8 AP005117.1-201ENST00000584346 1413 ntBASIC27.09■■□□□ 1.93
SHANK2Q9UPX8 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
SHANK2Q9UPX8 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
SHANK2Q9UPX8 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC27.08■■□□□ 1.93
SHANK2Q9UPX8 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC27.08■■□□□ 1.93
SHANK2Q9UPX8 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
SHANK2Q9UPX8 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
SHANK2Q9UPX8 COX10-202ENST00000429152 875 ntTSL 2 BASIC27.08■■□□□ 1.93
SHANK2Q9UPX8 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.93
SHANK2Q9UPX8 POLD2P1-201ENST00000511220 997 ntBASIC27.08■■□□□ 1.93
SHANK2Q9UPX8 AC139887.3-201ENST00000568585 713 ntBASIC27.08■■□□□ 1.93
SHANK2Q9UPX8 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC27.08■■□□□ 1.93
SHANK2Q9UPX8 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
SHANK2Q9UPX8 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC27.08■■□□□ 1.93
SHANK2Q9UPX8 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC27.08■■□□□ 1.93
SHANK2Q9UPX8 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC27.08■■□□□ 1.93
SHANK2Q9UPX8 KRT8P47-201ENST00000604727 1398 ntBASIC27.08■■□□□ 1.92
SHANK2Q9UPX8 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC27.07■■□□□ 1.92
SHANK2Q9UPX8 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC27.07■■□□□ 1.92
SHANK2Q9UPX8 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC27.07■■□□□ 1.92
SHANK2Q9UPX8 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC27.07■■□□□ 1.92
SHANK2Q9UPX8 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC27.07■■□□□ 1.92
SHANK2Q9UPX8 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC27.07■■□□□ 1.92
SHANK2Q9UPX8 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC27.07■■□□□ 1.92
SHANK2Q9UPX8 AC025062.2-201ENST00000605477 670 ntBASIC27.07■■□□□ 1.92
SHANK2Q9UPX8 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC27.07■■□□□ 1.92
SHANK2Q9UPX8 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC27.07■■□□□ 1.92
SHANK2Q9UPX8 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
SHANK2Q9UPX8 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC27.07■■□□□ 1.92
SHANK2Q9UPX8 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC27.07■■□□□ 1.92
SHANK2Q9UPX8 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC27.07■■□□□ 1.92
SHANK2Q9UPX8 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
SHANK2Q9UPX8 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC27.07■■□□□ 1.92
SHANK2Q9UPX8 RNPS1P1-201ENST00000507437 918 ntBASIC27.06■■□□□ 1.92
SHANK2Q9UPX8 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
SHANK2Q9UPX8 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC27.06■■□□□ 1.92
SHANK2Q9UPX8 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC27.06■■□□□ 1.92
SHANK2Q9UPX8 MTDHP3-201ENST00000594186 672 ntBASIC27.06■■□□□ 1.92
SHANK2Q9UPX8 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC27.06■■□□□ 1.92
SHANK2Q9UPX8 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC27.06■■□□□ 1.92
SHANK2Q9UPX8 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
SHANK2Q9UPX8 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC27.06■■□□□ 1.92
SHANK2Q9UPX8 AC005082.1-201ENST00000413042 2259 ntBASIC27.06■■□□□ 1.92
SHANK2Q9UPX8 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC27.06■■□□□ 1.92
SHANK2Q9UPX8 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC27.06■■□□□ 1.92
SHANK2Q9UPX8 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC27.06■■□□□ 1.92
SHANK2Q9UPX8 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
SHANK2Q9UPX8 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC27.06■■□□□ 1.92
SHANK2Q9UPX8 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
SHANK2Q9UPX8 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
SHANK2Q9UPX8 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms