Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LIN7CQ9NUP9 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
LIN7CQ9NUP9 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
LIN7CQ9NUP9 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LIN7CQ9NUP9 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LIN7CQ9NUP9 AL357033.4-201ENST00000617703 1807 ntBASIC15.26■□□□□ 0.03
LIN7CQ9NUP9 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LIN7CQ9NUP9 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
LIN7CQ9NUP9 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LIN7CQ9NUP9 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LIN7CQ9NUP9 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LIN7CQ9NUP9 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
LIN7CQ9NUP9 AP000997.3-201ENST00000623333 2250 ntBASIC15.26■□□□□ 0.03
LIN7CQ9NUP9 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LIN7CQ9NUP9 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
LIN7CQ9NUP9 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC15.25■□□□□ 0.03
LIN7CQ9NUP9 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LIN7CQ9NUP9 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
LIN7CQ9NUP9 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
LIN7CQ9NUP9 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LIN7CQ9NUP9 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC15.25■□□□□ 0.03
LIN7CQ9NUP9 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LIN7CQ9NUP9 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LIN7CQ9NUP9 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
LIN7CQ9NUP9 LTB4R2-202ENST00000528054 3092 ntBASIC15.25■□□□□ 0.03
LIN7CQ9NUP9 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LIN7CQ9NUP9 UNC93B2-201ENST00000285383 730 ntBASIC15.25■□□□□ 0.03
LIN7CQ9NUP9 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
LIN7CQ9NUP9 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC15.25■□□□□ 0.03
LIN7CQ9NUP9 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC15.25■□□□□ 0.03
LIN7CQ9NUP9 SLC25A6P5-201ENST00000435663 894 ntBASIC15.25■□□□□ 0.03
LIN7CQ9NUP9 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC15.25■□□□□ 0.03
LIN7CQ9NUP9 FAM207BP-201ENST00000447172 505 ntBASIC15.25■□□□□ 0.03
LIN7CQ9NUP9 AC011506.1-201ENST00000474329 610 ntBASIC15.25■□□□□ 0.03
LIN7CQ9NUP9 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC15.25■□□□□ 0.03
LIN7CQ9NUP9 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC15.25■□□□□ 0.03
LIN7CQ9NUP9 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LIN7CQ9NUP9 GRAMD4P8-201ENST00000605465 1115 ntBASIC15.25■□□□□ 0.03
LIN7CQ9NUP9 SNX21-213ENST00000614929 587 ntTSL 5 BASIC15.25■□□□□ 0.03
LIN7CQ9NUP9 AC130371.2-201ENST00000619443 611 ntBASIC15.25■□□□□ 0.03
LIN7CQ9NUP9 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LIN7CQ9NUP9 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LIN7CQ9NUP9 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LIN7CQ9NUP9 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC15.25■□□□□ 0.03
LIN7CQ9NUP9 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LIN7CQ9NUP9 CD276-203ENST00000537340 2439 ntTSL 2 BASIC15.25■□□□□ 0.03
LIN7CQ9NUP9 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LIN7CQ9NUP9 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC15.25■□□□□ 0.03
LIN7CQ9NUP9 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
LIN7CQ9NUP9 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC15.25■□□□□ 0.03
LIN7CQ9NUP9 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
LIN7CQ9NUP9 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC15.25■□□□□ 0.03
LIN7CQ9NUP9 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
LIN7CQ9NUP9 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LIN7CQ9NUP9 AC067852.2-201ENST00000590513 2313 ntBASIC15.25■□□□□ 0.03
LIN7CQ9NUP9 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LIN7CQ9NUP9 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LIN7CQ9NUP9 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC15.24■□□□□ 0.03
LIN7CQ9NUP9 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LIN7CQ9NUP9 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LIN7CQ9NUP9 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LIN7CQ9NUP9 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LIN7CQ9NUP9 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LIN7CQ9NUP9 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LIN7CQ9NUP9 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
LIN7CQ9NUP9 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
LIN7CQ9NUP9 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
LIN7CQ9NUP9 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
LIN7CQ9NUP9 MESTP1-201ENST00000404287 994 ntBASIC15.24■□□□□ 0.03
LIN7CQ9NUP9 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LIN7CQ9NUP9 AC091390.4-202ENST00000476426 537 ntBASIC15.24■□□□□ 0.03
LIN7CQ9NUP9 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC15.24■□□□□ 0.03
LIN7CQ9NUP9 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC15.24■□□□□ 0.03
LIN7CQ9NUP9 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LIN7CQ9NUP9 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
LIN7CQ9NUP9 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC15.24■□□□□ 0.03
LIN7CQ9NUP9 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC15.24■□□□□ 0.03
LIN7CQ9NUP9 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LIN7CQ9NUP9 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC15.24■□□□□ 0.03
LIN7CQ9NUP9 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC15.24■□□□□ 0.03
LIN7CQ9NUP9 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
LIN7CQ9NUP9 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC15.24■□□□□ 0.03
LIN7CQ9NUP9 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC15.24■□□□□ 0.03
LIN7CQ9NUP9 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC15.24■□□□□ 0.03
LIN7CQ9NUP9 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC15.24■□□□□ 0.03
LIN7CQ9NUP9 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC15.24■□□□□ 0.03
LIN7CQ9NUP9 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
LIN7CQ9NUP9 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LIN7CQ9NUP9 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
LIN7CQ9NUP9 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC15.24■□□□□ 0.03
LIN7CQ9NUP9 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC15.24■□□□□ 0.03
LIN7CQ9NUP9 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LIN7CQ9NUP9 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LIN7CQ9NUP9 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LIN7CQ9NUP9 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
LIN7CQ9NUP9 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LIN7CQ9NUP9 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LIN7CQ9NUP9 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LIN7CQ9NUP9 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
LIN7CQ9NUP9 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms