Protein–RNA interactions for Protein: Q9NR64

KLHL1, Kelch-like protein 1, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1Q9NR64 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.25■□□□□ 0.35
KLHL1Q9NR64 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
KLHL1Q9NR64 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.25■□□□□ 0.35
KLHL1Q9NR64 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
KLHL1Q9NR64 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
KLHL1Q9NR64 AL023284.2-201ENST00000405850 579 ntBASIC17.25■□□□□ 0.35
KLHL1Q9NR64 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
KLHL1Q9NR64 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.25■□□□□ 0.35
KLHL1Q9NR64 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
KLHL1Q9NR64 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
KLHL1Q9NR64 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
KLHL1Q9NR64 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KLHL1Q9NR64 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KLHL1Q9NR64 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
KLHL1Q9NR64 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
KLHL1Q9NR64 IER3-202ENST00000376377 1350 ntBASIC17.25■□□□□ 0.35
KLHL1Q9NR64 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.25■□□□□ 0.35
KLHL1Q9NR64 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KLHL1Q9NR64 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
KLHL1Q9NR64 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
KLHL1Q9NR64 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
KLHL1Q9NR64 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
KLHL1Q9NR64 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
KLHL1Q9NR64 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
KLHL1Q9NR64 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
KLHL1Q9NR64 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
KLHL1Q9NR64 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
KLHL1Q9NR64 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.24■□□□□ 0.35
KLHL1Q9NR64 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KLHL1Q9NR64 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.24■□□□□ 0.35
KLHL1Q9NR64 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KLHL1Q9NR64 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
KLHL1Q9NR64 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
KLHL1Q9NR64 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.24■□□□□ 0.35
KLHL1Q9NR64 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.24■□□□□ 0.35
KLHL1Q9NR64 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KLHL1Q9NR64 MCCD1P1-208ENST00000445732 328 ntBASIC17.24■□□□□ 0.35
KLHL1Q9NR64 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
KLHL1Q9NR64 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
KLHL1Q9NR64 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.24■□□□□ 0.35
KLHL1Q9NR64 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.24■□□□□ 0.35
KLHL1Q9NR64 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
KLHL1Q9NR64 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.24■□□□□ 0.35
KLHL1Q9NR64 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.24■□□□□ 0.35
KLHL1Q9NR64 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
KLHL1Q9NR64 AC093458.2-201ENST00000623150 629 ntBASIC17.24■□□□□ 0.35
KLHL1Q9NR64 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.24■□□□□ 0.35
KLHL1Q9NR64 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
KLHL1Q9NR64 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KLHL1Q9NR64 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KLHL1Q9NR64 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.24■□□□□ 0.35
KLHL1Q9NR64 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KLHL1Q9NR64 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KLHL1Q9NR64 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
KLHL1Q9NR64 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
KLHL1Q9NR64 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.24■□□□□ 0.35
KLHL1Q9NR64 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
KLHL1Q9NR64 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.24■□□□□ 0.35
KLHL1Q9NR64 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
KLHL1Q9NR64 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
KLHL1Q9NR64 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KLHL1Q9NR64 FP475955.4-201ENST00000623131 1990 ntBASIC17.24■□□□□ 0.35
KLHL1Q9NR64 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
KLHL1Q9NR64 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KLHL1Q9NR64 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.23■□□□□ 0.35
KLHL1Q9NR64 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
KLHL1Q9NR64 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.23■□□□□ 0.35
KLHL1Q9NR64 AC104581.1-202ENST00000635932 2618 ntBASIC17.23■□□□□ 0.35
KLHL1Q9NR64 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KLHL1Q9NR64 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KLHL1Q9NR64 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KLHL1Q9NR64 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.23■□□□□ 0.35
KLHL1Q9NR64 VENTXP5-201ENST00000523979 775 ntBASIC17.23■□□□□ 0.35
KLHL1Q9NR64 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.23■□□□□ 0.35
KLHL1Q9NR64 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.23■□□□□ 0.35
KLHL1Q9NR64 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.23■□□□□ 0.35
KLHL1Q9NR64 AC024243.1-201ENST00000609234 778 ntBASIC17.23■□□□□ 0.35
KLHL1Q9NR64 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.23■□□□□ 0.35
KLHL1Q9NR64 AC018470.1-201ENST00000624790 3129 ntBASIC17.23■□□□□ 0.35
KLHL1Q9NR64 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
KLHL1Q9NR64 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.23■□□□□ 0.35
KLHL1Q9NR64 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.23■□□□□ 0.35
KLHL1Q9NR64 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KLHL1Q9NR64 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
KLHL1Q9NR64 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
KLHL1Q9NR64 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KLHL1Q9NR64 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
KLHL1Q9NR64 AC005332.8-201ENST00000622750 2735 ntBASIC17.23■□□□□ 0.35
KLHL1Q9NR64 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
KLHL1Q9NR64 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
KLHL1Q9NR64 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KLHL1Q9NR64 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KLHL1Q9NR64 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KLHL1Q9NR64 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KLHL1Q9NR64 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.23■□□□□ 0.35
KLHL1Q9NR64 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.22■□□□□ 0.35
KLHL1Q9NR64 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.22■□□□□ 0.35
KLHL1Q9NR64 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.22■□□□□ 0.35
KLHL1Q9NR64 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
KLHL1Q9NR64 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms