Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
SND1-IT1Q9HBX3 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
SND1-IT1Q9HBX3 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SND1-IT1Q9HBX3 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
SND1-IT1Q9HBX3 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC12.28□□□□□ -0.44
SND1-IT1Q9HBX3 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC12.28□□□□□ -0.44
SND1-IT1Q9HBX3 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC12.28□□□□□ -0.44
SND1-IT1Q9HBX3 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
SND1-IT1Q9HBX3 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SND1-IT1Q9HBX3 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC12.28□□□□□ -0.44
SND1-IT1Q9HBX3 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SND1-IT1Q9HBX3 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC12.28□□□□□ -0.44
SND1-IT1Q9HBX3 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SND1-IT1Q9HBX3 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC12.28□□□□□ -0.44
SND1-IT1Q9HBX3 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
SND1-IT1Q9HBX3 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
SND1-IT1Q9HBX3 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SND1-IT1Q9HBX3 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SND1-IT1Q9HBX3 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SND1-IT1Q9HBX3 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SND1-IT1Q9HBX3 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SND1-IT1Q9HBX3 MIR663A-201ENST00000385250 93 ntBASIC12.28□□□□□ -0.44
SND1-IT1Q9HBX3 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC12.28□□□□□ -0.44
SND1-IT1Q9HBX3 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC12.28□□□□□ -0.44
SND1-IT1Q9HBX3 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC12.28□□□□□ -0.44
SND1-IT1Q9HBX3 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SND1-IT1Q9HBX3 AC091874.3-201ENST00000512672 1195 ntBASIC12.28□□□□□ -0.44
SND1-IT1Q9HBX3 RHOD-202ENST00000532559 538 ntTSL 3 BASIC12.28□□□□□ -0.44
SND1-IT1Q9HBX3 OAS3-207ENST00000551007 998 ntTSL 2 BASIC12.28□□□□□ -0.44
SND1-IT1Q9HBX3 AL160286.2-201ENST00000567150 934 ntBASIC12.28□□□□□ -0.44
SND1-IT1Q9HBX3 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC12.28□□□□□ -0.44
SND1-IT1Q9HBX3 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC12.28□□□□□ -0.44
SND1-IT1Q9HBX3 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC12.28□□□□□ -0.44
SND1-IT1Q9HBX3 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC12.28□□□□□ -0.44
SND1-IT1Q9HBX3 HLA-B-256ENST00000639848 1089 ntBASIC12.28□□□□□ -0.44
SND1-IT1Q9HBX3 AC073111.5-205ENST00000641717 521 ntBASIC12.28□□□□□ -0.44
SND1-IT1Q9HBX3 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SND1-IT1Q9HBX3 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
SND1-IT1Q9HBX3 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SND1-IT1Q9HBX3 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC12.28□□□□□ -0.44
SND1-IT1Q9HBX3 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SND1-IT1Q9HBX3 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SND1-IT1Q9HBX3 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SND1-IT1Q9HBX3 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SND1-IT1Q9HBX3 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC12.28□□□□□ -0.44
SND1-IT1Q9HBX3 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SND1-IT1Q9HBX3 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SND1-IT1Q9HBX3 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SND1-IT1Q9HBX3 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SND1-IT1Q9HBX3 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SND1-IT1Q9HBX3 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SND1-IT1Q9HBX3 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SND1-IT1Q9HBX3 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SND1-IT1Q9HBX3 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SND1-IT1Q9HBX3 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC12.28□□□□□ -0.44
SND1-IT1Q9HBX3 AL499627.1-201ENST00000569373 2188 ntBASIC12.28□□□□□ -0.44
SND1-IT1Q9HBX3 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SND1-IT1Q9HBX3 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SND1-IT1Q9HBX3 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.44
SND1-IT1Q9HBX3 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC12.27□□□□□ -0.44
SND1-IT1Q9HBX3 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SND1-IT1Q9HBX3 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SND1-IT1Q9HBX3 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.44
SND1-IT1Q9HBX3 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SND1-IT1Q9HBX3 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.44
SND1-IT1Q9HBX3 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC12.27□□□□□ -0.44
SND1-IT1Q9HBX3 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC12.27□□□□□ -0.44
SND1-IT1Q9HBX3 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC12.27□□□□□ -0.44
SND1-IT1Q9HBX3 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
SND1-IT1Q9HBX3 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SND1-IT1Q9HBX3 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SND1-IT1Q9HBX3 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SND1-IT1Q9HBX3 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC12.27□□□□□ -0.45
SND1-IT1Q9HBX3 GATS-209ENST00000454084 1030 ntTSL 3 BASIC12.27□□□□□ -0.45
SND1-IT1Q9HBX3 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC12.27□□□□□ -0.45
SND1-IT1Q9HBX3 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC12.27□□□□□ -0.45
SND1-IT1Q9HBX3 AL162430.1-201ENST00000480705 870 ntBASIC12.27□□□□□ -0.45
SND1-IT1Q9HBX3 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC12.27□□□□□ -0.45
SND1-IT1Q9HBX3 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC12.27□□□□□ -0.45
SND1-IT1Q9HBX3 BET1L-207ENST00000529614 560 ntTSL 5 BASIC12.27□□□□□ -0.45
SND1-IT1Q9HBX3 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC12.27□□□□□ -0.45
SND1-IT1Q9HBX3 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC12.27□□□□□ -0.45
SND1-IT1Q9HBX3 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC12.27□□□□□ -0.45
SND1-IT1Q9HBX3 AC022517.1-201ENST00000592429 346 ntBASIC12.27□□□□□ -0.45
SND1-IT1Q9HBX3 AC120498.8-201ENST00000614275 531 ntBASIC12.27□□□□□ -0.45
SND1-IT1Q9HBX3 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC12.27□□□□□ -0.45
SND1-IT1Q9HBX3 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
SND1-IT1Q9HBX3 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SND1-IT1Q9HBX3 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
SND1-IT1Q9HBX3 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
SND1-IT1Q9HBX3 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SND1-IT1Q9HBX3 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC12.27□□□□□ -0.45
SND1-IT1Q9HBX3 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SND1-IT1Q9HBX3 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SND1-IT1Q9HBX3 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.45
SND1-IT1Q9HBX3 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.45
SND1-IT1Q9HBX3 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SND1-IT1Q9HBX3 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SND1-IT1Q9HBX3 AC093677.2-201ENST00000600169 1863 ntBASIC12.27□□□□□ -0.45
SND1-IT1Q9HBX3 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC12.27□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms