Protein–RNA interactions for Protein: Q9BZA8

PCDH11Y, Protocadherin-11 Y-linked, humanhuman

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11YQ9BZA8 AL356309.3-201ENST00000624132 1934 ntBASIC23.69■■□□□ 1.38
PCDH11YQ9BZA8 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDH11YQ9BZA8 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PCDH11YQ9BZA8 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDH11YQ9BZA8 AFG3L1P-217ENST00000557444 2447 ntBASIC23.69■■□□□ 1.38
PCDH11YQ9BZA8 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDH11YQ9BZA8 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDH11YQ9BZA8 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDH11YQ9BZA8 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC23.69■■□□□ 1.38
PCDH11YQ9BZA8 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC23.68■■□□□ 1.38
PCDH11YQ9BZA8 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PCDH11YQ9BZA8 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
PCDH11YQ9BZA8 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
PCDH11YQ9BZA8 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC23.68■■□□□ 1.38
PCDH11YQ9BZA8 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PCDH11YQ9BZA8 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PCDH11YQ9BZA8 SNCG-201ENST00000348795 684 ntTSL 2 BASIC23.68■■□□□ 1.38
PCDH11YQ9BZA8 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC23.68■■□□□ 1.38
PCDH11YQ9BZA8 RAB17-203ENST00000409576 466 ntTSL 3 BASIC23.68■■□□□ 1.38
PCDH11YQ9BZA8 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
PCDH11YQ9BZA8 AC092183.1-201ENST00000469884 875 ntBASIC23.68■■□□□ 1.38
PCDH11YQ9BZA8 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC23.68■■□□□ 1.38
PCDH11YQ9BZA8 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDH11YQ9BZA8 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PCDH11YQ9BZA8 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDH11YQ9BZA8 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PCDH11YQ9BZA8 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDH11YQ9BZA8 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC23.68■■□□□ 1.38
PCDH11YQ9BZA8 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDH11YQ9BZA8 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
PCDH11YQ9BZA8 HLA-J-201ENST00000462773 1622 ntBASIC23.68■■□□□ 1.38
PCDH11YQ9BZA8 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC23.68■■□□□ 1.38
PCDH11YQ9BZA8 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDH11YQ9BZA8 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PCDH11YQ9BZA8 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDH11YQ9BZA8 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC23.68■■□□□ 1.38
PCDH11YQ9BZA8 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDH11YQ9BZA8 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PCDH11YQ9BZA8 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDH11YQ9BZA8 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDH11YQ9BZA8 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
PCDH11YQ9BZA8 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PCDH11YQ9BZA8 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PCDH11YQ9BZA8 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC23.67■■□□□ 1.38
PCDH11YQ9BZA8 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC23.67■■□□□ 1.38
PCDH11YQ9BZA8 OR7E14P-202ENST00000530490 1290 ntBASIC23.67■■□□□ 1.38
PCDH11YQ9BZA8 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC23.67■■□□□ 1.38
PCDH11YQ9BZA8 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC23.67■■□□□ 1.38
PCDH11YQ9BZA8 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC23.67■■□□□ 1.38
PCDH11YQ9BZA8 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDH11YQ9BZA8 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDH11YQ9BZA8 AL499627.1-201ENST00000569373 2188 ntBASIC23.67■■□□□ 1.38
PCDH11YQ9BZA8 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PCDH11YQ9BZA8 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDH11YQ9BZA8 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
PCDH11YQ9BZA8 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDH11YQ9BZA8 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDH11YQ9BZA8 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDH11YQ9BZA8 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
PCDH11YQ9BZA8 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDH11YQ9BZA8 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
PCDH11YQ9BZA8 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PCDH11YQ9BZA8 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDH11YQ9BZA8 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDH11YQ9BZA8 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDH11YQ9BZA8 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC23.66■■□□□ 1.38
PCDH11YQ9BZA8 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PCDH11YQ9BZA8 FAM220CP-201ENST00000395253 831 ntBASIC23.66■■□□□ 1.38
PCDH11YQ9BZA8 AC098831.1-202ENST00000438821 336 ntBASIC23.66■■□□□ 1.38
PCDH11YQ9BZA8 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC23.66■■□□□ 1.38
PCDH11YQ9BZA8 AC012640.2-201ENST00000561606 901 ntBASIC23.66■■□□□ 1.38
PCDH11YQ9BZA8 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC23.66■■□□□ 1.38
PCDH11YQ9BZA8 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PCDH11YQ9BZA8 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC23.66■■□□□ 1.38
PCDH11YQ9BZA8 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC23.66■■□□□ 1.38
PCDH11YQ9BZA8 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
PCDH11YQ9BZA8 AC027601.4-201ENST00000611259 610 ntBASIC23.66■■□□□ 1.38
PCDH11YQ9BZA8 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC23.66■■□□□ 1.38
PCDH11YQ9BZA8 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PCDH11YQ9BZA8 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
PCDH11YQ9BZA8 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PCDH11YQ9BZA8 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PCDH11YQ9BZA8 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC23.66■■□□□ 1.38
PCDH11YQ9BZA8 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDH11YQ9BZA8 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC23.66■■□□□ 1.38
PCDH11YQ9BZA8 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PCDH11YQ9BZA8 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PCDH11YQ9BZA8 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC23.65■■□□□ 1.38
PCDH11YQ9BZA8 CTNS-203ENST00000399306 803 ntTSL 3 BASIC23.65■■□□□ 1.38
PCDH11YQ9BZA8 MED15P5-201ENST00000423150 992 ntBASIC23.65■■□□□ 1.38
PCDH11YQ9BZA8 AC034105.1-201ENST00000563488 319 ntBASIC23.65■■□□□ 1.38
PCDH11YQ9BZA8 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC23.65■■□□□ 1.38
PCDH11YQ9BZA8 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC23.65■■□□□ 1.38
PCDH11YQ9BZA8 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
PCDH11YQ9BZA8 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC23.65■■□□□ 1.38
PCDH11YQ9BZA8 AC140113.2-201ENST00000604370 208 ntBASIC23.65■■□□□ 1.38
PCDH11YQ9BZA8 FAM197Y3-203ENST00000618346 717 ntBASIC23.65■■□□□ 1.38
PCDH11YQ9BZA8 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC23.65■■□□□ 1.38
PCDH11YQ9BZA8 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PCDH11YQ9BZA8 COBL-210ENST00000632460 1941 ntTSL 5 BASIC23.65■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms