Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL25A1Q9BXS0 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL25A1Q9BXS0 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.42■□□□□ 0.54
COL25A1Q9BXS0 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
COL25A1Q9BXS0 FAM86MP-201ENST00000340703 885 ntBASIC18.42■□□□□ 0.54
COL25A1Q9BXS0 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL25A1Q9BXS0 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC18.42■□□□□ 0.54
COL25A1Q9BXS0 AC069335.1-201ENST00000489972 472 ntBASIC18.42■□□□□ 0.54
COL25A1Q9BXS0 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC18.42■□□□□ 0.54
COL25A1Q9BXS0 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC18.42■□□□□ 0.54
COL25A1Q9BXS0 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
COL25A1Q9BXS0 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC18.42■□□□□ 0.54
COL25A1Q9BXS0 RPL28-209ENST00000560055 670 ntTSL 3 BASIC18.42■□□□□ 0.54
COL25A1Q9BXS0 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC18.42■□□□□ 0.54
COL25A1Q9BXS0 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC18.42■□□□□ 0.54
COL25A1Q9BXS0 AC003101.2-201ENST00000612557 442 ntBASIC18.42■□□□□ 0.54
COL25A1Q9BXS0 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.42■□□□□ 0.54
COL25A1Q9BXS0 AL033527.4-201ENST00000641026 673 ntBASIC18.42■□□□□ 0.54
COL25A1Q9BXS0 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL25A1Q9BXS0 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
COL25A1Q9BXS0 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
COL25A1Q9BXS0 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
COL25A1Q9BXS0 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
COL25A1Q9BXS0 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.42■□□□□ 0.54
COL25A1Q9BXS0 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL25A1Q9BXS0 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.41■□□□□ 0.54
COL25A1Q9BXS0 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
COL25A1Q9BXS0 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL25A1Q9BXS0 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
COL25A1Q9BXS0 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.41■□□□□ 0.54
COL25A1Q9BXS0 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
COL25A1Q9BXS0 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.41■□□□□ 0.54
COL25A1Q9BXS0 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
COL25A1Q9BXS0 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
COL25A1Q9BXS0 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
COL25A1Q9BXS0 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
COL25A1Q9BXS0 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC18.41■□□□□ 0.54
COL25A1Q9BXS0 TIMM8BP1-201ENST00000452384 211 ntBASIC18.41■□□□□ 0.54
COL25A1Q9BXS0 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
COL25A1Q9BXS0 GIMAP3P-201ENST00000495150 836 ntBASIC18.41■□□□□ 0.54
COL25A1Q9BXS0 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC18.41■□□□□ 0.54
COL25A1Q9BXS0 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC18.41■□□□□ 0.54
COL25A1Q9BXS0 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
COL25A1Q9BXS0 AC073592.4-201ENST00000623827 446 ntBASIC18.41■□□□□ 0.54
COL25A1Q9BXS0 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC18.41■□□□□ 0.54
COL25A1Q9BXS0 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL25A1Q9BXS0 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
COL25A1Q9BXS0 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL25A1Q9BXS0 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
COL25A1Q9BXS0 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL25A1Q9BXS0 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL25A1Q9BXS0 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.41■□□□□ 0.54
COL25A1Q9BXS0 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
COL25A1Q9BXS0 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.4■□□□□ 0.54
COL25A1Q9BXS0 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.4■□□□□ 0.54
COL25A1Q9BXS0 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL25A1Q9BXS0 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL25A1Q9BXS0 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COL25A1Q9BXS0 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.4■□□□□ 0.54
COL25A1Q9BXS0 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL25A1Q9BXS0 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL25A1Q9BXS0 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL25A1Q9BXS0 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COL25A1Q9BXS0 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.4■□□□□ 0.54
COL25A1Q9BXS0 AC079776.1-201ENST00000401540 1152 ntBASIC18.4■□□□□ 0.54
COL25A1Q9BXS0 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC18.4■□□□□ 0.54
COL25A1Q9BXS0 AC005237.2-201ENST00000434368 219 ntBASIC18.4■□□□□ 0.54
COL25A1Q9BXS0 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC18.4■□□□□ 0.54
COL25A1Q9BXS0 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL25A1Q9BXS0 RPS15P9-201ENST00000494093 319 ntBASIC18.4■□□□□ 0.54
COL25A1Q9BXS0 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC18.4■□□□□ 0.54
COL25A1Q9BXS0 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC18.4■□□□□ 0.54
COL25A1Q9BXS0 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.4■□□□□ 0.54
COL25A1Q9BXS0 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC18.4■□□□□ 0.54
COL25A1Q9BXS0 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COL25A1Q9BXS0 AC007064.4-201ENST00000637740 555 ntBASIC18.4■□□□□ 0.54
COL25A1Q9BXS0 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COL25A1Q9BXS0 AL024507.2-201ENST00000606070 2574 ntBASIC18.4■□□□□ 0.54
COL25A1Q9BXS0 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC18.4■□□□□ 0.54
COL25A1Q9BXS0 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.4■□□□□ 0.54
COL25A1Q9BXS0 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL25A1Q9BXS0 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COL25A1Q9BXS0 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC18.4■□□□□ 0.54
COL25A1Q9BXS0 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC18.4■□□□□ 0.54
COL25A1Q9BXS0 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL25A1Q9BXS0 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC18.4■□□□□ 0.54
COL25A1Q9BXS0 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
COL25A1Q9BXS0 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
COL25A1Q9BXS0 LINC01521-201ENST00000504184 1943 ntBASIC18.39■□□□□ 0.53
COL25A1Q9BXS0 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COL25A1Q9BXS0 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
COL25A1Q9BXS0 RPF1-202ENST00000370656 724 ntTSL 2 BASIC18.39■□□□□ 0.53
COL25A1Q9BXS0 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC18.39■□□□□ 0.53
COL25A1Q9BXS0 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC18.39■□□□□ 0.53
COL25A1Q9BXS0 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
COL25A1Q9BXS0 AC092552.1-201ENST00000547243 906 ntBASIC18.39■□□□□ 0.53
COL25A1Q9BXS0 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC18.39■□□□□ 0.53
COL25A1Q9BXS0 AC023141.13-201ENST00000604991 943 ntBASIC18.39■□□□□ 0.53
COL25A1Q9BXS0 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
COL25A1Q9BXS0 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms