Protein–RNA interactions for Protein: Q9BV44

THUMPD3, THUMP domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3Q9BV44 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
THUMPD3Q9BV44 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
THUMPD3Q9BV44 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
THUMPD3Q9BV44 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
THUMPD3Q9BV44 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
THUMPD3Q9BV44 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
THUMPD3Q9BV44 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
THUMPD3Q9BV44 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.54■□□□□ 0.4
THUMPD3Q9BV44 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
THUMPD3Q9BV44 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
THUMPD3Q9BV44 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
THUMPD3Q9BV44 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
THUMPD3Q9BV44 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
THUMPD3Q9BV44 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
THUMPD3Q9BV44 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
THUMPD3Q9BV44 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
THUMPD3Q9BV44 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
THUMPD3Q9BV44 AL353807.1-201ENST00000427475 662 ntBASIC17.54■□□□□ 0.4
THUMPD3Q9BV44 AC091390.4-202ENST00000476426 537 ntBASIC17.54■□□□□ 0.4
THUMPD3Q9BV44 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
THUMPD3Q9BV44 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.54■□□□□ 0.4
THUMPD3Q9BV44 RARRES2P10-201ENST00000564312 460 ntBASIC17.54■□□□□ 0.4
THUMPD3Q9BV44 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.54■□□□□ 0.4
THUMPD3Q9BV44 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.54■□□□□ 0.4
THUMPD3Q9BV44 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
THUMPD3Q9BV44 AL353708.3-201ENST00000610272 989 ntBASIC17.54■□□□□ 0.4
THUMPD3Q9BV44 TMEM191A-211ENST00000637163 1067 ntBASIC17.54■□□□□ 0.4
THUMPD3Q9BV44 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
THUMPD3Q9BV44 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
THUMPD3Q9BV44 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
THUMPD3Q9BV44 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
THUMPD3Q9BV44 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.54■□□□□ 0.4
THUMPD3Q9BV44 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
THUMPD3Q9BV44 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
THUMPD3Q9BV44 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.54■□□□□ 0.4
THUMPD3Q9BV44 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
THUMPD3Q9BV44 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.53■□□□□ 0.4
THUMPD3Q9BV44 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.53■□□□□ 0.4
THUMPD3Q9BV44 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
THUMPD3Q9BV44 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.53■□□□□ 0.4
THUMPD3Q9BV44 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.53■□□□□ 0.4
THUMPD3Q9BV44 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.53■□□□□ 0.4
THUMPD3Q9BV44 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
THUMPD3Q9BV44 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.53■□□□□ 0.4
THUMPD3Q9BV44 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.53■□□□□ 0.4
THUMPD3Q9BV44 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
THUMPD3Q9BV44 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
THUMPD3Q9BV44 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
THUMPD3Q9BV44 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.53■□□□□ 0.4
THUMPD3Q9BV44 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
THUMPD3Q9BV44 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
THUMPD3Q9BV44 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
THUMPD3Q9BV44 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
THUMPD3Q9BV44 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
THUMPD3Q9BV44 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.53■□□□□ 0.4
THUMPD3Q9BV44 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.53■□□□□ 0.4
THUMPD3Q9BV44 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
THUMPD3Q9BV44 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.53■□□□□ 0.4
THUMPD3Q9BV44 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.53■□□□□ 0.4
THUMPD3Q9BV44 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.53■□□□□ 0.4
THUMPD3Q9BV44 AF186192.3-201ENST00000583427 947 ntBASIC17.53■□□□□ 0.4
THUMPD3Q9BV44 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.53■□□□□ 0.4
THUMPD3Q9BV44 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
THUMPD3Q9BV44 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
THUMPD3Q9BV44 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
THUMPD3Q9BV44 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
THUMPD3Q9BV44 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
THUMPD3Q9BV44 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.53■□□□□ 0.4
THUMPD3Q9BV44 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
THUMPD3Q9BV44 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.53■□□□□ 0.4
THUMPD3Q9BV44 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.53■□□□□ 0.4
THUMPD3Q9BV44 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
THUMPD3Q9BV44 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
THUMPD3Q9BV44 LINC00896-202ENST00000609602 2128 ntBASIC17.53■□□□□ 0.4
THUMPD3Q9BV44 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
THUMPD3Q9BV44 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
THUMPD3Q9BV44 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
THUMPD3Q9BV44 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.53■□□□□ 0.4
THUMPD3Q9BV44 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
THUMPD3Q9BV44 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
THUMPD3Q9BV44 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
THUMPD3Q9BV44 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
THUMPD3Q9BV44 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
THUMPD3Q9BV44 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.52■□□□□ 0.4
THUMPD3Q9BV44 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
THUMPD3Q9BV44 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
THUMPD3Q9BV44 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
THUMPD3Q9BV44 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
THUMPD3Q9BV44 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
THUMPD3Q9BV44 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
THUMPD3Q9BV44 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
THUMPD3Q9BV44 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
THUMPD3Q9BV44 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
THUMPD3Q9BV44 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
THUMPD3Q9BV44 SLC25A6P5-201ENST00000435663 894 ntBASIC17.52■□□□□ 0.4
THUMPD3Q9BV44 KSR1P1-201ENST00000446298 240 ntBASIC17.52■□□□□ 0.4
THUMPD3Q9BV44 UBE2SP1-201ENST00000450587 669 ntBASIC17.52■□□□□ 0.4
THUMPD3Q9BV44 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
THUMPD3Q9BV44 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
THUMPD3Q9BV44 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms