Protein–RNA interactions for Protein: Q9BT78

COPS4, COP9 signalosome complex subunit 4, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4Q9BT78 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
COPS4Q9BT78 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.82■□□□□ 0.28
COPS4Q9BT78 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
COPS4Q9BT78 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
COPS4Q9BT78 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
COPS4Q9BT78 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
COPS4Q9BT78 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
COPS4Q9BT78 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COPS4Q9BT78 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC16.82■□□□□ 0.28
COPS4Q9BT78 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
COPS4Q9BT78 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COPS4Q9BT78 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
COPS4Q9BT78 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC16.82■□□□□ 0.28
COPS4Q9BT78 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COPS4Q9BT78 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.82■□□□□ 0.28
COPS4Q9BT78 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
COPS4Q9BT78 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC16.82■□□□□ 0.28
COPS4Q9BT78 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC16.82■□□□□ 0.28
COPS4Q9BT78 F2R-202ENST00000505600 442 ntTSL 2 BASIC16.82■□□□□ 0.28
COPS4Q9BT78 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC16.82■□□□□ 0.28
COPS4Q9BT78 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COPS4Q9BT78 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COPS4Q9BT78 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
COPS4Q9BT78 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COPS4Q9BT78 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COPS4Q9BT78 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
COPS4Q9BT78 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
COPS4Q9BT78 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
COPS4Q9BT78 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
COPS4Q9BT78 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
COPS4Q9BT78 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COPS4Q9BT78 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COPS4Q9BT78 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
COPS4Q9BT78 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.82■□□□□ 0.28
COPS4Q9BT78 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
COPS4Q9BT78 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COPS4Q9BT78 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC16.81■□□□□ 0.28
COPS4Q9BT78 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COPS4Q9BT78 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.81■□□□□ 0.28
COPS4Q9BT78 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
COPS4Q9BT78 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
COPS4Q9BT78 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
COPS4Q9BT78 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COPS4Q9BT78 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COPS4Q9BT78 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
COPS4Q9BT78 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC16.81■□□□□ 0.28
COPS4Q9BT78 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC16.81■□□□□ 0.28
COPS4Q9BT78 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
COPS4Q9BT78 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC16.81■□□□□ 0.28
COPS4Q9BT78 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC16.81■□□□□ 0.28
COPS4Q9BT78 MTDHP1-201ENST00000605323 784 ntBASIC16.81■□□□□ 0.28
COPS4Q9BT78 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC16.81■□□□□ 0.28
COPS4Q9BT78 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC16.81■□□□□ 0.28
COPS4Q9BT78 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC16.81■□□□□ 0.28
COPS4Q9BT78 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
COPS4Q9BT78 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
COPS4Q9BT78 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
COPS4Q9BT78 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.81■□□□□ 0.28
COPS4Q9BT78 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
COPS4Q9BT78 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COPS4Q9BT78 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.81■□□□□ 0.28
COPS4Q9BT78 AD000864.1-201ENST00000624076 2295 ntBASIC16.81■□□□□ 0.28
COPS4Q9BT78 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
COPS4Q9BT78 FER1L4-210ENST00000615531 5998 ntBASIC16.81■□□□□ 0.28
COPS4Q9BT78 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
COPS4Q9BT78 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COPS4Q9BT78 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COPS4Q9BT78 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
COPS4Q9BT78 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COPS4Q9BT78 AC008556.1-201ENST00000610908 2040 ntBASIC16.8■□□□□ 0.28
COPS4Q9BT78 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COPS4Q9BT78 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
COPS4Q9BT78 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COPS4Q9BT78 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
COPS4Q9BT78 KRT8P45-201ENST00000414328 1447 ntBASIC16.8■□□□□ 0.28
COPS4Q9BT78 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
COPS4Q9BT78 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COPS4Q9BT78 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC16.8■□□□□ 0.28
COPS4Q9BT78 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
COPS4Q9BT78 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COPS4Q9BT78 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
COPS4Q9BT78 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COPS4Q9BT78 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COPS4Q9BT78 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COPS4Q9BT78 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
COPS4Q9BT78 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COPS4Q9BT78 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COPS4Q9BT78 AC239809.2-201ENST00000415381 517 ntBASIC16.8■□□□□ 0.28
COPS4Q9BT78 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
COPS4Q9BT78 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.8■□□□□ 0.28
COPS4Q9BT78 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
COPS4Q9BT78 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
COPS4Q9BT78 KRT18P6-201ENST00000555540 1265 ntBASIC16.8■□□□□ 0.28
COPS4Q9BT78 C1QL1P1-201ENST00000568105 661 ntBASIC16.8■□□□□ 0.28
COPS4Q9BT78 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC16.8■□□□□ 0.28
COPS4Q9BT78 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.8■□□□□ 0.28
COPS4Q9BT78 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.8■□□□□ 0.28
COPS4Q9BT78 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
COPS4Q9BT78 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
COPS4Q9BT78 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms