Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
MUC4Q99102 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
MUC4Q99102 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
MUC4Q99102 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
MUC4Q99102 AL096828.2-201ENST00000567259 1965 ntBASIC13.39□□□□□ -0.27
MUC4Q99102 KRT8P50-201ENST00000562022 1438 ntBASIC13.39□□□□□ -0.27
MUC4Q99102 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
MUC4Q99102 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
MUC4Q99102 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC13.38□□□□□ -0.27
MUC4Q99102 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
MUC4Q99102 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
MUC4Q99102 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC13.38□□□□□ -0.27
MUC4Q99102 CA15P1-201ENST00000481698 905 ntBASIC13.38□□□□□ -0.27
MUC4Q99102 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC13.38□□□□□ -0.27
MUC4Q99102 AL590326.2-201ENST00000625139 305 ntBASIC13.38□□□□□ -0.27
MUC4Q99102 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC13.38□□□□□ -0.27
MUC4Q99102 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
MUC4Q99102 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
MUC4Q99102 GPAT2P1-201ENST00000444924 1672 ntBASIC13.38□□□□□ -0.27
MUC4Q99102 WAC-202ENST00000347934 2839 ntTSL 5 BASIC13.38□□□□□ -0.27
MUC4Q99102 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
MUC4Q99102 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC13.38□□□□□ -0.27
MUC4Q99102 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC13.38□□□□□ -0.27
MUC4Q99102 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
MUC4Q99102 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
MUC4Q99102 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC13.38□□□□□ -0.27
MUC4Q99102 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
MUC4Q99102 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
MUC4Q99102 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
MUC4Q99102 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
MUC4Q99102 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
MUC4Q99102 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
MUC4Q99102 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
MUC4Q99102 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
MUC4Q99102 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC13.38□□□□□ -0.27
MUC4Q99102 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
MUC4Q99102 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC13.38□□□□□ -0.27
MUC4Q99102 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
MUC4Q99102 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC13.38□□□□□ -0.27
MUC4Q99102 MFAP1P1-201ENST00000442257 1255 ntBASIC13.38□□□□□ -0.27
MUC4Q99102 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC13.38□□□□□ -0.27
MUC4Q99102 DUT-205ENST00000558813 769 ntTSL 2 BASIC13.38□□□□□ -0.27
MUC4Q99102 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC13.38□□□□□ -0.27
MUC4Q99102 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC13.38□□□□□ -0.27
MUC4Q99102 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
MUC4Q99102 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
MUC4Q99102 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
MUC4Q99102 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
MUC4Q99102 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC13.38□□□□□ -0.27
MUC4Q99102 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
MUC4Q99102 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
MUC4Q99102 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
MUC4Q99102 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
MUC4Q99102 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC13.37□□□□□ -0.27
MUC4Q99102 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
MUC4Q99102 HLA-DQB1-201ENST00000374943 1656 ntBASIC13.37□□□□□ -0.27
MUC4Q99102 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
MUC4Q99102 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
MUC4Q99102 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
MUC4Q99102 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
MUC4Q99102 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
MUC4Q99102 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC13.37□□□□□ -0.27
MUC4Q99102 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
MUC4Q99102 AL355355.2-201ENST00000442321 338 ntBASIC13.37□□□□□ -0.27
MUC4Q99102 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
MUC4Q99102 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC13.37□□□□□ -0.27
MUC4Q99102 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC13.37□□□□□ -0.27
MUC4Q99102 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
MUC4Q99102 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
MUC4Q99102 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
MUC4Q99102 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC13.37□□□□□ -0.27
MUC4Q99102 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
MUC4Q99102 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
MUC4Q99102 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
MUC4Q99102 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
MUC4Q99102 AL109659.2-201ENST00000606809 1674 ntBASIC13.37□□□□□ -0.27
MUC4Q99102 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
MUC4Q99102 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
MUC4Q99102 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC13.37□□□□□ -0.27
MUC4Q99102 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
MUC4Q99102 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
MUC4Q99102 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
MUC4Q99102 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
MUC4Q99102 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
MUC4Q99102 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
MUC4Q99102 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC13.37□□□□□ -0.27
MUC4Q99102 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
MUC4Q99102 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC13.37□□□□□ -0.27
MUC4Q99102 AC130371.2-201ENST00000619443 611 ntBASIC13.37□□□□□ -0.27
MUC4Q99102 SP100-208ENST00000427101 1922 ntTSL 2 BASIC13.36□□□□□ -0.27
MUC4Q99102 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
MUC4Q99102 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
MUC4Q99102 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC13.36□□□□□ -0.27
MUC4Q99102 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
MUC4Q99102 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
MUC4Q99102 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
MUC4Q99102 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
MUC4Q99102 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC13.36□□□□□ -0.27
MUC4Q99102 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
MUC4Q99102 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms