Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC17.27■□□□□ 0.36
NR1H4Q96RI1 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.27■□□□□ 0.35
NR1H4Q96RI1 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NR1H4Q96RI1 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
NR1H4Q96RI1 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
NR1H4Q96RI1 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.27■□□□□ 0.35
NR1H4Q96RI1 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NR1H4Q96RI1 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NR1H4Q96RI1 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.27■□□□□ 0.35
NR1H4Q96RI1 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
NR1H4Q96RI1 PCDHA14-201ENST00000506751 2298 ntBASIC17.27■□□□□ 0.35
NR1H4Q96RI1 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NR1H4Q96RI1 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.27■□□□□ 0.35
NR1H4Q96RI1 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NR1H4Q96RI1 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
NR1H4Q96RI1 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NR1H4Q96RI1 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NR1H4Q96RI1 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NR1H4Q96RI1 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
NR1H4Q96RI1 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NR1H4Q96RI1 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
NR1H4Q96RI1 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
NR1H4Q96RI1 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
NR1H4Q96RI1 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.26■□□□□ 0.35
NR1H4Q96RI1 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NR1H4Q96RI1 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NR1H4Q96RI1 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NR1H4Q96RI1 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NR1H4Q96RI1 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NR1H4Q96RI1 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.26■□□□□ 0.35
NR1H4Q96RI1 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
NR1H4Q96RI1 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
NR1H4Q96RI1 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.26■□□□□ 0.35
NR1H4Q96RI1 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NR1H4Q96RI1 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.26■□□□□ 0.35
NR1H4Q96RI1 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NR1H4Q96RI1 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NR1H4Q96RI1 TFP1-202ENST00000475455 1573 ntBASIC17.26■□□□□ 0.35
NR1H4Q96RI1 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
NR1H4Q96RI1 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NR1H4Q96RI1 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NR1H4Q96RI1 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.26■□□□□ 0.35
NR1H4Q96RI1 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.26■□□□□ 0.35
NR1H4Q96RI1 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.26■□□□□ 0.35
NR1H4Q96RI1 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NR1H4Q96RI1 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NR1H4Q96RI1 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NR1H4Q96RI1 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.26■□□□□ 0.35
NR1H4Q96RI1 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NR1H4Q96RI1 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
NR1H4Q96RI1 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
NR1H4Q96RI1 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NR1H4Q96RI1 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NR1H4Q96RI1 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
NR1H4Q96RI1 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.25■□□□□ 0.35
NR1H4Q96RI1 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.25■□□□□ 0.35
NR1H4Q96RI1 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NR1H4Q96RI1 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
NR1H4Q96RI1 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NR1H4Q96RI1 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NR1H4Q96RI1 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NR1H4Q96RI1 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC17.25■□□□□ 0.35
NR1H4Q96RI1 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.25■□□□□ 0.35
NR1H4Q96RI1 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.25■□□□□ 0.35
NR1H4Q96RI1 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NR1H4Q96RI1 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NR1H4Q96RI1 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
NR1H4Q96RI1 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC17.25■□□□□ 0.35
NR1H4Q96RI1 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NR1H4Q96RI1 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NR1H4Q96RI1 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NR1H4Q96RI1 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NR1H4Q96RI1 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
NR1H4Q96RI1 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NR1H4Q96RI1 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
NR1H4Q96RI1 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.25■□□□□ 0.35
NR1H4Q96RI1 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NR1H4Q96RI1 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.25■□□□□ 0.35
NR1H4Q96RI1 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
NR1H4Q96RI1 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.25■□□□□ 0.35
NR1H4Q96RI1 AC008556.1-201ENST00000610908 2040 ntBASIC17.25■□□□□ 0.35
NR1H4Q96RI1 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NR1H4Q96RI1 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
NR1H4Q96RI1 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
NR1H4Q96RI1 AGGF1P2-201ENST00000426656 2106 ntBASIC17.24■□□□□ 0.35
NR1H4Q96RI1 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.24■□□□□ 0.35
NR1H4Q96RI1 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NR1H4Q96RI1 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
NR1H4Q96RI1 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.24■□□□□ 0.35
NR1H4Q96RI1 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.24■□□□□ 0.35
NR1H4Q96RI1 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
NR1H4Q96RI1 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
NR1H4Q96RI1 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
NR1H4Q96RI1 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NR1H4Q96RI1 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.24■□□□□ 0.35
NR1H4Q96RI1 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NR1H4Q96RI1 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC17.24■□□□□ 0.35
NR1H4Q96RI1 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.24■□□□□ 0.35
NR1H4Q96RI1 SLC7A5P1-201ENST00000568957 537 ntBASIC17.24■□□□□ 0.35
NR1H4Q96RI1 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms