Protein–RNA interactions for Protein: Q96KN7

RPGRIP1, X-linked retinitis pigmentosa GTPase regulator-interacting protein 1, humanhuman

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1Q96KN7 Telomerase-vert.1-201ENST00000363312 438 ntBASIC20.2■□□□□ 0.82
RPGRIP1Q96KN7 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC20.2■□□□□ 0.82
RPGRIP1Q96KN7 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC20.2■□□□□ 0.82
RPGRIP1Q96KN7 AP003041.3-201ENST00000527151 707 ntBASIC20.2■□□□□ 0.82
RPGRIP1Q96KN7 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC20.2■□□□□ 0.82
RPGRIP1Q96KN7 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC20.2■□□□□ 0.82
RPGRIP1Q96KN7 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
RPGRIP1Q96KN7 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
RPGRIP1Q96KN7 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RPGRIP1Q96KN7 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
RPGRIP1Q96KN7 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RPGRIP1Q96KN7 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RPGRIP1Q96KN7 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RPGRIP1Q96KN7 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
RPGRIP1Q96KN7 KRT8P45-201ENST00000414328 1447 ntBASIC20.19■□□□□ 0.82
RPGRIP1Q96KN7 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RPGRIP1Q96KN7 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RPGRIP1Q96KN7 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RPGRIP1Q96KN7 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC20.19■□□□□ 0.82
RPGRIP1Q96KN7 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RPGRIP1Q96KN7 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RPGRIP1Q96KN7 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
RPGRIP1Q96KN7 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC20.19■□□□□ 0.82
RPGRIP1Q96KN7 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC20.19■□□□□ 0.82
RPGRIP1Q96KN7 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
RPGRIP1Q96KN7 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
RPGRIP1Q96KN7 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20.19■□□□□ 0.82
RPGRIP1Q96KN7 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
RPGRIP1Q96KN7 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RPGRIP1Q96KN7 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RPGRIP1Q96KN7 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC20.19■□□□□ 0.82
RPGRIP1Q96KN7 TSPY21P-201ENST00000433481 731 ntBASIC20.19■□□□□ 0.82
RPGRIP1Q96KN7 ATP5G2P1-201ENST00000433580 426 ntBASIC20.19■□□□□ 0.82
RPGRIP1Q96KN7 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC20.19■□□□□ 0.82
RPGRIP1Q96KN7 TSPY23P-201ENST00000440136 739 ntBASIC20.19■□□□□ 0.82
RPGRIP1Q96KN7 AC083849.1-201ENST00000615227 514 ntBASIC20.19■□□□□ 0.82
RPGRIP1Q96KN7 BCL10-202ENST00000620248 774 ntTSL 5 BASIC20.19■□□□□ 0.82
RPGRIP1Q96KN7 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
RPGRIP1Q96KN7 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RPGRIP1Q96KN7 AL162741.1-201ENST00000565563 1558 ntBASIC20.19■□□□□ 0.82
RPGRIP1Q96KN7 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
RPGRIP1Q96KN7 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC20.19■□□□□ 0.82
RPGRIP1Q96KN7 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
RPGRIP1Q96KN7 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC20.19■□□□□ 0.82
RPGRIP1Q96KN7 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.19■□□□□ 0.82
RPGRIP1Q96KN7 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RPGRIP1Q96KN7 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RPGRIP1Q96KN7 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
RPGRIP1Q96KN7 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RPGRIP1Q96KN7 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RPGRIP1Q96KN7 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC20.19■□□□□ 0.82
RPGRIP1Q96KN7 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
RPGRIP1Q96KN7 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RPGRIP1Q96KN7 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
RPGRIP1Q96KN7 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RPGRIP1Q96KN7 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RPGRIP1Q96KN7 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
RPGRIP1Q96KN7 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC20.18■□□□□ 0.82
RPGRIP1Q96KN7 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.18■□□□□ 0.82
RPGRIP1Q96KN7 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RPGRIP1Q96KN7 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.18■□□□□ 0.82
RPGRIP1Q96KN7 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.18■□□□□ 0.82
RPGRIP1Q96KN7 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RPGRIP1Q96KN7 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
RPGRIP1Q96KN7 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC20.18■□□□□ 0.82
RPGRIP1Q96KN7 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
RPGRIP1Q96KN7 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RPGRIP1Q96KN7 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.18■□□□□ 0.82
RPGRIP1Q96KN7 HCG11-201ENST00000411553 5696 ntBASIC20.18■□□□□ 0.82
RPGRIP1Q96KN7 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.18■□□□□ 0.82
RPGRIP1Q96KN7 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RPGRIP1Q96KN7 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RPGRIP1Q96KN7 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RPGRIP1Q96KN7 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
RPGRIP1Q96KN7 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RPGRIP1Q96KN7 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC20.17■□□□□ 0.82
RPGRIP1Q96KN7 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RPGRIP1Q96KN7 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.17■□□□□ 0.82
RPGRIP1Q96KN7 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.17■□□□□ 0.82
RPGRIP1Q96KN7 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RPGRIP1Q96KN7 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RPGRIP1Q96KN7 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RPGRIP1Q96KN7 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.17■□□□□ 0.82
RPGRIP1Q96KN7 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
RPGRIP1Q96KN7 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC20.17■□□□□ 0.82
RPGRIP1Q96KN7 CA15P1-201ENST00000481698 905 ntBASIC20.17■□□□□ 0.82
RPGRIP1Q96KN7 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.17■□□□□ 0.82
RPGRIP1Q96KN7 RN7SL510P-201ENST00000581311 263 ntBASIC20.17■□□□□ 0.82
RPGRIP1Q96KN7 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
RPGRIP1Q96KN7 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.17■□□□□ 0.82
RPGRIP1Q96KN7 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC20.17■□□□□ 0.82
RPGRIP1Q96KN7 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC20.17■□□□□ 0.82
RPGRIP1Q96KN7 GATB-213ENST00000515812 1893 ntTSL 5 BASIC20.17■□□□□ 0.82
RPGRIP1Q96KN7 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC20.17■□□□□ 0.82
RPGRIP1Q96KN7 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
RPGRIP1Q96KN7 LINC01311-201ENST00000565162 1445 ntBASIC20.17■□□□□ 0.82
RPGRIP1Q96KN7 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RPGRIP1Q96KN7 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RPGRIP1Q96KN7 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RPGRIP1Q96KN7 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms