Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
APH1AQ96BI3 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
APH1AQ96BI3 AC073592.3-201ENST00000625118 1834 ntBASIC16.22■□□□□ 0.19
APH1AQ96BI3 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC16.21■□□□□ 0.19
APH1AQ96BI3 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
APH1AQ96BI3 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
APH1AQ96BI3 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
APH1AQ96BI3 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
APH1AQ96BI3 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
APH1AQ96BI3 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
APH1AQ96BI3 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
APH1AQ96BI3 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
APH1AQ96BI3 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
APH1AQ96BI3 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
APH1AQ96BI3 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
APH1AQ96BI3 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
APH1AQ96BI3 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
APH1AQ96BI3 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
APH1AQ96BI3 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
APH1AQ96BI3 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.21■□□□□ 0.19
APH1AQ96BI3 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
APH1AQ96BI3 AL645929.1-201ENST00000420084 975 ntBASIC16.21■□□□□ 0.19
APH1AQ96BI3 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.21■□□□□ 0.19
APH1AQ96BI3 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
APH1AQ96BI3 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.21■□□□□ 0.19
APH1AQ96BI3 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
APH1AQ96BI3 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.21■□□□□ 0.19
APH1AQ96BI3 FAM86EP-206ENST00000510506 987 ntBASIC16.21■□□□□ 0.19
APH1AQ96BI3 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.21■□□□□ 0.19
APH1AQ96BI3 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.21■□□□□ 0.19
APH1AQ96BI3 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.21■□□□□ 0.19
APH1AQ96BI3 AC091076.1-201ENST00000610741 619 ntBASIC16.21■□□□□ 0.19
APH1AQ96BI3 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.21■□□□□ 0.19
APH1AQ96BI3 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
APH1AQ96BI3 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
APH1AQ96BI3 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
APH1AQ96BI3 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
APH1AQ96BI3 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
APH1AQ96BI3 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
APH1AQ96BI3 AL138781.2-201ENST00000617896 1843 ntBASIC16.21■□□□□ 0.19
APH1AQ96BI3 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.21■□□□□ 0.19
APH1AQ96BI3 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.21■□□□□ 0.19
APH1AQ96BI3 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
APH1AQ96BI3 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.2■□□□□ 0.18
APH1AQ96BI3 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC16.2■□□□□ 0.18
APH1AQ96BI3 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
APH1AQ96BI3 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.2■□□□□ 0.18
APH1AQ96BI3 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
APH1AQ96BI3 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.2■□□□□ 0.18
APH1AQ96BI3 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
APH1AQ96BI3 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
APH1AQ96BI3 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
APH1AQ96BI3 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
APH1AQ96BI3 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
APH1AQ96BI3 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
APH1AQ96BI3 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
APH1AQ96BI3 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.2■□□□□ 0.18
APH1AQ96BI3 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
APH1AQ96BI3 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
APH1AQ96BI3 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
APH1AQ96BI3 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
APH1AQ96BI3 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
APH1AQ96BI3 PCED1CP-201ENST00000419887 785 ntBASIC16.2■□□□□ 0.18
APH1AQ96BI3 KRT18P48-201ENST00000434763 852 ntBASIC16.2■□□□□ 0.18
APH1AQ96BI3 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.2■□□□□ 0.18
APH1AQ96BI3 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.2■□□□□ 0.18
APH1AQ96BI3 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.2■□□□□ 0.18
APH1AQ96BI3 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.2■□□□□ 0.18
APH1AQ96BI3 AC024563.2-201ENST00000603282 481 ntBASIC16.2■□□□□ 0.18
APH1AQ96BI3 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
APH1AQ96BI3 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.2■□□□□ 0.18
APH1AQ96BI3 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
APH1AQ96BI3 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
APH1AQ96BI3 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
APH1AQ96BI3 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
APH1AQ96BI3 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
APH1AQ96BI3 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
APH1AQ96BI3 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.2■□□□□ 0.18
APH1AQ96BI3 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
APH1AQ96BI3 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
APH1AQ96BI3 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.2■□□□□ 0.18
APH1AQ96BI3 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
APH1AQ96BI3 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC16.2■□□□□ 0.18
APH1AQ96BI3 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
APH1AQ96BI3 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
APH1AQ96BI3 AC005332.1-201ENST00000577698 1310 ntBASIC16.19■□□□□ 0.18
APH1AQ96BI3 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
APH1AQ96BI3 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
APH1AQ96BI3 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
APH1AQ96BI3 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
APH1AQ96BI3 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.19■□□□□ 0.18
APH1AQ96BI3 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.19■□□□□ 0.18
APH1AQ96BI3 IER3-202ENST00000376377 1350 ntBASIC16.19■□□□□ 0.18
APH1AQ96BI3 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
APH1AQ96BI3 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
APH1AQ96BI3 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
APH1AQ96BI3 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
APH1AQ96BI3 MIR662-201ENST00000384847 95 ntBASIC16.19■□□□□ 0.18
APH1AQ96BI3 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.19■□□□□ 0.18
APH1AQ96BI3 SPDYE13P-201ENST00000445314 798 ntBASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms