Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HPS3Q969F9 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
HPS3Q969F9 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC20.3■□□□□ 0.84
HPS3Q969F9 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC20.3■□□□□ 0.84
HPS3Q969F9 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HPS3Q969F9 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
HPS3Q969F9 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HPS3Q969F9 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HPS3Q969F9 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.3■□□□□ 0.84
HPS3Q969F9 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC20.3■□□□□ 0.84
HPS3Q969F9 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HPS3Q969F9 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC20.3■□□□□ 0.84
HPS3Q969F9 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC20.3■□□□□ 0.84
HPS3Q969F9 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC20.3■□□□□ 0.84
HPS3Q969F9 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HPS3Q969F9 AL441883.1-201ENST00000566170 1045 ntBASIC20.3■□□□□ 0.84
HPS3Q969F9 NEK4P2-201ENST00000580004 1012 ntBASIC20.3■□□□□ 0.84
HPS3Q969F9 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC20.3■□□□□ 0.84
HPS3Q969F9 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
HPS3Q969F9 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
HPS3Q969F9 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
HPS3Q969F9 AC068880.1-201ENST00000507289 2297 ntBASIC20.3■□□□□ 0.84
HPS3Q969F9 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC20.3■□□□□ 0.84
HPS3Q969F9 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HPS3Q969F9 AL024508.2-201ENST00000607749 1894 ntBASIC20.3■□□□□ 0.84
HPS3Q969F9 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HPS3Q969F9 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HPS3Q969F9 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HPS3Q969F9 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC20.3■□□□□ 0.84
HPS3Q969F9 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
HPS3Q969F9 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
HPS3Q969F9 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
HPS3Q969F9 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HPS3Q969F9 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC20.29■□□□□ 0.84
HPS3Q969F9 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HPS3Q969F9 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HPS3Q969F9 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HPS3Q969F9 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
HPS3Q969F9 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HPS3Q969F9 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
HPS3Q969F9 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HPS3Q969F9 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
HPS3Q969F9 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
HPS3Q969F9 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HPS3Q969F9 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HPS3Q969F9 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
HPS3Q969F9 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
HPS3Q969F9 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HPS3Q969F9 AL137013.1-201ENST00000432946 1228 ntBASIC20.29■□□□□ 0.84
HPS3Q969F9 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HPS3Q969F9 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HPS3Q969F9 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
HPS3Q969F9 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HPS3Q969F9 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HPS3Q969F9 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC20.29■□□□□ 0.84
HPS3Q969F9 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC20.29■□□□□ 0.84
HPS3Q969F9 P4HB-223ENST00000576390 439 ntTSL 4 BASIC20.29■□□□□ 0.84
HPS3Q969F9 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HPS3Q969F9 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HPS3Q969F9 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
HPS3Q969F9 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HPS3Q969F9 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HPS3Q969F9 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HPS3Q969F9 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HPS3Q969F9 SP100-208ENST00000427101 1922 ntTSL 2 BASIC20.28■□□□□ 0.84
HPS3Q969F9 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC20.28■□□□□ 0.84
HPS3Q969F9 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HPS3Q969F9 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
HPS3Q969F9 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
HPS3Q969F9 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
HPS3Q969F9 LIN28AP1-201ENST00000429574 405 ntBASIC20.28■□□□□ 0.84
HPS3Q969F9 ATP5G1P1-201ENST00000448724 379 ntBASIC20.28■□□□□ 0.84
HPS3Q969F9 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
HPS3Q969F9 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HPS3Q969F9 AL512604.3-201ENST00000569583 964 ntBASIC20.28■□□□□ 0.84
HPS3Q969F9 USF2-205ENST00000594064 1179 ntTSL 2 BASIC20.28■□□□□ 0.84
HPS3Q969F9 AC139887.4-201ENST00000607877 719 ntBASIC20.28■□□□□ 0.84
HPS3Q969F9 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC20.28■□□□□ 0.84
HPS3Q969F9 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HPS3Q969F9 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HPS3Q969F9 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HPS3Q969F9 AR-207ENST00000612010 3896 ntTSL 5 BASIC20.28■□□□□ 0.84
HPS3Q969F9 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HPS3Q969F9 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
HPS3Q969F9 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HPS3Q969F9 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
HPS3Q969F9 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
HPS3Q969F9 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HPS3Q969F9 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HPS3Q969F9 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
HPS3Q969F9 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
HPS3Q969F9 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HPS3Q969F9 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HPS3Q969F9 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC20.27■□□□□ 0.84
HPS3Q969F9 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HPS3Q969F9 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HPS3Q969F9 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HPS3Q969F9 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC20.27■□□□□ 0.84
HPS3Q969F9 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC20.27■□□□□ 0.84
HPS3Q969F9 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms