Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNOT9Q92600 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CNOT9Q92600 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.89■□□□□ 0.29
CNOT9Q92600 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNOT9Q92600 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNOT9Q92600 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CNOT9Q92600 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNOT9Q92600 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
CNOT9Q92600 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNOT9Q92600 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.89■□□□□ 0.29
CNOT9Q92600 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CNOT9Q92600 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNOT9Q92600 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CNOT9Q92600 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CNOT9Q92600 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.89■□□□□ 0.29
CNOT9Q92600 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC16.89■□□□□ 0.29
CNOT9Q92600 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.89■□□□□ 0.29
CNOT9Q92600 AC112497.1-201ENST00000624824 639 ntBASIC16.89■□□□□ 0.29
CNOT9Q92600 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CNOT9Q92600 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNOT9Q92600 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
CNOT9Q92600 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNOT9Q92600 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CNOT9Q92600 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CNOT9Q92600 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNOT9Q92600 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CNOT9Q92600 LINC01568-207ENST00000641790 1380 ntBASIC16.89■□□□□ 0.29
CNOT9Q92600 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.88■□□□□ 0.29
CNOT9Q92600 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNOT9Q92600 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.88■□□□□ 0.29
CNOT9Q92600 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNOT9Q92600 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CNOT9Q92600 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNOT9Q92600 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNOT9Q92600 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CNOT9Q92600 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.88■□□□□ 0.29
CNOT9Q92600 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.88■□□□□ 0.29
CNOT9Q92600 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.88■□□□□ 0.29
CNOT9Q92600 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CNOT9Q92600 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CNOT9Q92600 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNOT9Q92600 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNOT9Q92600 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
CNOT9Q92600 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CNOT9Q92600 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CNOT9Q92600 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CNOT9Q92600 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNOT9Q92600 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNOT9Q92600 AL133373.2-201ENST00000623187 2828 ntBASIC16.88■□□□□ 0.29
CNOT9Q92600 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.87■□□□□ 0.29
CNOT9Q92600 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CNOT9Q92600 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CNOT9Q92600 AC009102.3-201ENST00000623118 1491 ntBASIC16.87■□□□□ 0.29
CNOT9Q92600 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.87■□□□□ 0.29
CNOT9Q92600 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CNOT9Q92600 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CNOT9Q92600 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CNOT9Q92600 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CNOT9Q92600 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.87■□□□□ 0.29
CNOT9Q92600 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.87■□□□□ 0.29
CNOT9Q92600 GMCL1P1-201ENST00000463439 1581 ntBASIC16.87■□□□□ 0.29
CNOT9Q92600 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.87■□□□□ 0.29
CNOT9Q92600 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CNOT9Q92600 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.87■□□□□ 0.29
CNOT9Q92600 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CNOT9Q92600 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC16.87■□□□□ 0.29
CNOT9Q92600 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CNOT9Q92600 MIR149-201ENST00000384879 89 ntBASIC16.87■□□□□ 0.29
CNOT9Q92600 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CNOT9Q92600 AC009947.2-201ENST00000444014 672 ntBASIC16.87■□□□□ 0.29
CNOT9Q92600 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.87■□□□□ 0.29
CNOT9Q92600 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.87■□□□□ 0.29
CNOT9Q92600 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC16.87■□□□□ 0.29
CNOT9Q92600 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.87■□□□□ 0.29
CNOT9Q92600 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.87■□□□□ 0.29
CNOT9Q92600 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CNOT9Q92600 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CNOT9Q92600 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.87■□□□□ 0.29
CNOT9Q92600 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CNOT9Q92600 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.87■□□□□ 0.29
CNOT9Q92600 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CNOT9Q92600 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CNOT9Q92600 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.87■□□□□ 0.29
CNOT9Q92600 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.87■□□□□ 0.29
CNOT9Q92600 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.87■□□□□ 0.29
CNOT9Q92600 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.87■□□□□ 0.29
CNOT9Q92600 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.87■□□□□ 0.29
CNOT9Q92600 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.87■□□□□ 0.29
CNOT9Q92600 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.87■□□□□ 0.29
CNOT9Q92600 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.86■□□□□ 0.29
CNOT9Q92600 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CNOT9Q92600 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.86■□□□□ 0.29
CNOT9Q92600 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
CNOT9Q92600 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.86■□□□□ 0.29
CNOT9Q92600 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CNOT9Q92600 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CNOT9Q92600 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CNOT9Q92600 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CNOT9Q92600 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CNOT9Q92600 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms