Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
SYNE2Q8WXH0 IGF1-203ENST00000392904 761 ntTSL 5 BASIC7.36□□□□□ -1.23
SYNE2Q8WXH0 AL353779.1-201ENST00000434793 351 ntBASIC7.36□□□□□ -1.23
SYNE2Q8WXH0 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC7.36□□□□□ -1.23
SYNE2Q8WXH0 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
SYNE2Q8WXH0 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC7.36□□□□□ -1.23
SYNE2Q8WXH0 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
SYNE2Q8WXH0 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC7.36□□□□□ -1.23
SYNE2Q8WXH0 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC7.36□□□□□ -1.23
SYNE2Q8WXH0 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC7.36□□□□□ -1.23
SYNE2Q8WXH0 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC7.36□□□□□ -1.23
SYNE2Q8WXH0 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
SYNE2Q8WXH0 AC007551.1-201ENST00000457394 519 ntBASIC7.36□□□□□ -1.23
SYNE2Q8WXH0 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
SYNE2Q8WXH0 SNX29P1-201ENST00000548357 1007 ntBASIC7.36□□□□□ -1.23
SYNE2Q8WXH0 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC7.36□□□□□ -1.23
SYNE2Q8WXH0 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC7.36□□□□□ -1.23
SYNE2Q8WXH0 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC7.36□□□□□ -1.23
SYNE2Q8WXH0 AC015967.2-201ENST00000624092 234 ntBASIC7.36□□□□□ -1.23
SYNE2Q8WXH0 AC006435.4-201ENST00000625037 234 ntBASIC7.36□□□□□ -1.23
SYNE2Q8WXH0 AL356737.1-201ENST00000634391 234 ntBASIC7.36□□□□□ -1.23
SYNE2Q8WXH0 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC7.36□□□□□ -1.23
SYNE2Q8WXH0 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
SYNE2Q8WXH0 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
SYNE2Q8WXH0 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
SYNE2Q8WXH0 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
SYNE2Q8WXH0 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
SYNE2Q8WXH0 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC7.35□□□□□ -1.23
SYNE2Q8WXH0 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC7.35□□□□□ -1.23
SYNE2Q8WXH0 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SYNE2Q8WXH0 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SYNE2Q8WXH0 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
SYNE2Q8WXH0 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SYNE2Q8WXH0 SPTLC1P1-201ENST00000447199 261 ntBASIC7.35□□□□□ -1.23
SYNE2Q8WXH0 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC7.35□□□□□ -1.23
SYNE2Q8WXH0 KRT8P48-201ENST00000515599 1220 ntBASIC7.35□□□□□ -1.23
SYNE2Q8WXH0 API5-211ENST00000534695 560 ntTSL 5 BASIC7.35□□□□□ -1.23
SYNE2Q8WXH0 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC7.35□□□□□ -1.23
SYNE2Q8WXH0 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC7.35□□□□□ -1.23
SYNE2Q8WXH0 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
SYNE2Q8WXH0 AC009093.7-201ENST00000623853 1223 ntBASIC7.35□□□□□ -1.23
SYNE2Q8WXH0 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
SYNE2Q8WXH0 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
SYNE2Q8WXH0 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SYNE2Q8WXH0 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
SYNE2Q8WXH0 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
SYNE2Q8WXH0 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC7.35□□□□□ -1.23
SYNE2Q8WXH0 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
SYNE2Q8WXH0 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
SYNE2Q8WXH0 SLC25A24P2-201ENST00000415059 510 ntBASIC7.35□□□□□ -1.23
SYNE2Q8WXH0 ARTN-206ENST00000472435 402 ntTSL 3 BASIC7.35□□□□□ -1.23
SYNE2Q8WXH0 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC7.35□□□□□ -1.23
SYNE2Q8WXH0 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC7.35□□□□□ -1.23
SYNE2Q8WXH0 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC7.35□□□□□ -1.23
SYNE2Q8WXH0 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC7.35□□□□□ -1.23
SYNE2Q8WXH0 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
SYNE2Q8WXH0 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
SYNE2Q8WXH0 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
SYNE2Q8WXH0 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC7.35□□□□□ -1.23
SYNE2Q8WXH0 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC7.35□□□□□ -1.23
SYNE2Q8WXH0 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC7.35□□□□□ -1.23
SYNE2Q8WXH0 SMN2-210ENST00000511812 867 ntTSL 2 BASIC7.35□□□□□ -1.23
SYNE2Q8WXH0 AL583810.1-201ENST00000553344 1045 ntBASIC7.35□□□□□ -1.23
SYNE2Q8WXH0 AC026150.2-201ENST00000564693 1156 ntBASIC7.35□□□□□ -1.23
SYNE2Q8WXH0 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC7.35□□□□□ -1.23
SYNE2Q8WXH0 HCG18-245ENST00000602550 559 ntTSL 4 BASIC7.35□□□□□ -1.23
SYNE2Q8WXH0 BSG-214ENST00000614867 960 ntTSL 3 BASIC7.35□□□□□ -1.23
SYNE2Q8WXH0 AL109936.8-201ENST00000641772 604 ntBASIC7.35□□□□□ -1.23
SYNE2Q8WXH0 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC7.35□□□□□ -1.23
SYNE2Q8WXH0 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
SYNE2Q8WXH0 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
SYNE2Q8WXH0 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC7.35□□□□□ -1.23
SYNE2Q8WXH0 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC7.35□□□□□ -1.23
SYNE2Q8WXH0 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
SYNE2Q8WXH0 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC7.35□□□□□ -1.23
SYNE2Q8WXH0 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
SYNE2Q8WXH0 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC7.35□□□□□ -1.23
SYNE2Q8WXH0 BAD-207ENST00000544785 525 ntTSL 3 BASIC7.35□□□□□ -1.23
SYNE2Q8WXH0 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC7.35□□□□□ -1.23
SYNE2Q8WXH0 AL138828.2-201ENST00000615812 383 ntBASIC7.35□□□□□ -1.23
SYNE2Q8WXH0 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
SYNE2Q8WXH0 MED29-202ENST00000594368 1471 ntTSL 2 BASIC7.35□□□□□ -1.23
SYNE2Q8WXH0 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
SYNE2Q8WXH0 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SYNE2Q8WXH0 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
SYNE2Q8WXH0 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
SYNE2Q8WXH0 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
SYNE2Q8WXH0 UPF3AP2-201ENST00000457924 1132 ntBASIC7.35□□□□□ -1.23
SYNE2Q8WXH0 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC7.35□□□□□ -1.23
SYNE2Q8WXH0 AC104390.1-201ENST00000555663 520 ntBASIC7.35□□□□□ -1.23
SYNE2Q8WXH0 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
SYNE2Q8WXH0 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC7.35□□□□□ -1.23
SYNE2Q8WXH0 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC7.35□□□□□ -1.23
SYNE2Q8WXH0 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SYNE2Q8WXH0 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
SYNE2Q8WXH0 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
SYNE2Q8WXH0 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
SYNE2Q8WXH0 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
SYNE2Q8WXH0 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC7.34□□□□□ -1.23
SYNE2Q8WXH0 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms