Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC31.31■■■□□ 2.6
TRIM41Q8WV44 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC31.31■■■□□ 2.6
TRIM41Q8WV44 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC31.31■■■□□ 2.6
TRIM41Q8WV44 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC31.31■■■□□ 2.6
TRIM41Q8WV44 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC31.31■■■□□ 2.6
TRIM41Q8WV44 AL391807.1-203ENST00000604392 2365 ntBASIC31.31■■■□□ 2.6
TRIM41Q8WV44 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC31.31■■■□□ 2.6
TRIM41Q8WV44 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
TRIM41Q8WV44 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC31.3■■■□□ 2.6
TRIM41Q8WV44 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
TRIM41Q8WV44 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC31.3■■■□□ 2.6
TRIM41Q8WV44 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC31.3■■■□□ 2.6
TRIM41Q8WV44 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC31.3■■■□□ 2.6
TRIM41Q8WV44 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC31.3■■■□□ 2.6
TRIM41Q8WV44 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC31.3■■■□□ 2.6
TRIM41Q8WV44 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC31.3■■■□□ 2.6
TRIM41Q8WV44 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC31.3■■■□□ 2.6
TRIM41Q8WV44 AC074051.2-201ENST00000565115 352 ntBASIC31.3■■■□□ 2.6
TRIM41Q8WV44 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
TRIM41Q8WV44 SPEG-225ENST00000617028 815 ntTSL 5 BASIC31.3■■■□□ 2.6
TRIM41Q8WV44 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
TRIM41Q8WV44 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
TRIM41Q8WV44 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC31.29■■■□□ 2.6
TRIM41Q8WV44 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC31.29■■■□□ 2.6
TRIM41Q8WV44 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC31.29■■■□□ 2.6
TRIM41Q8WV44 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
TRIM41Q8WV44 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
TRIM41Q8WV44 AC099336.1-202ENST00000602961 463 ntBASIC31.29■■■□□ 2.6
TRIM41Q8WV44 AL136038.4-201ENST00000603606 1261 ntBASIC31.29■■■□□ 2.6
TRIM41Q8WV44 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC31.29■■■□□ 2.6
TRIM41Q8WV44 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC31.29■■■□□ 2.6
TRIM41Q8WV44 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
TRIM41Q8WV44 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
TRIM41Q8WV44 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
TRIM41Q8WV44 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
TRIM41Q8WV44 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC31.29■■■□□ 2.6
TRIM41Q8WV44 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC31.29■■■□□ 2.6
TRIM41Q8WV44 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC31.29■■■□□ 2.6
TRIM41Q8WV44 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
TRIM41Q8WV44 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
TRIM41Q8WV44 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
TRIM41Q8WV44 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC31.28■■■□□ 2.6
TRIM41Q8WV44 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
TRIM41Q8WV44 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC31.28■■■□□ 2.6
TRIM41Q8WV44 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC31.28■■■□□ 2.6
TRIM41Q8WV44 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
TRIM41Q8WV44 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
TRIM41Q8WV44 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
TRIM41Q8WV44 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
TRIM41Q8WV44 LITAF-211ENST00000572255 516 ntTSL 4 BASIC31.28■■■□□ 2.6
TRIM41Q8WV44 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC31.28■■■□□ 2.6
TRIM41Q8WV44 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC31.28■■■□□ 2.6
TRIM41Q8WV44 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
TRIM41Q8WV44 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC31.28■■■□□ 2.6
TRIM41Q8WV44 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC31.28■■■□□ 2.6
TRIM41Q8WV44 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
TRIM41Q8WV44 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC31.28■■■□□ 2.6
TRIM41Q8WV44 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC31.28■■■□□ 2.6
TRIM41Q8WV44 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
TRIM41Q8WV44 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
TRIM41Q8WV44 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC31.27■■■□□ 2.6
TRIM41Q8WV44 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
TRIM41Q8WV44 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC31.27■■■□□ 2.6
TRIM41Q8WV44 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
TRIM41Q8WV44 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
TRIM41Q8WV44 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC31.27■■■□□ 2.6
TRIM41Q8WV44 AF186996.4-201ENST00000467186 377 ntBASIC31.27■■■□□ 2.6
TRIM41Q8WV44 AC139887.3-201ENST00000568585 713 ntBASIC31.27■■■□□ 2.6
TRIM41Q8WV44 MIR3180-4-201ENST00000582223 153 ntBASIC31.27■■■□□ 2.6
TRIM41Q8WV44 AL035252.4-201ENST00000624174 288 ntBASIC31.27■■■□□ 2.6
TRIM41Q8WV44 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
TRIM41Q8WV44 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC31.27■■■□□ 2.6
TRIM41Q8WV44 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC31.27■■■□□ 2.6
TRIM41Q8WV44 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
TRIM41Q8WV44 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC31.26■■■□□ 2.6
TRIM41Q8WV44 AL162741.1-201ENST00000565563 1558 ntBASIC31.26■■■□□ 2.6
TRIM41Q8WV44 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC31.26■■■□□ 2.6
TRIM41Q8WV44 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
TRIM41Q8WV44 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC31.26■■■□□ 2.59
TRIM41Q8WV44 TSPY22P-201ENST00000427496 604 ntBASIC31.26■■■□□ 2.59
TRIM41Q8WV44 AC022494.1-201ENST00000466044 728 ntBASIC31.26■■■□□ 2.59
TRIM41Q8WV44 NMU-202ENST00000505262 693 ntTSL 3 BASIC31.26■■■□□ 2.59
TRIM41Q8WV44 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC31.26■■■□□ 2.59
TRIM41Q8WV44 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC31.26■■■□□ 2.59
TRIM41Q8WV44 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC31.26■■■□□ 2.59
TRIM41Q8WV44 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
TRIM41Q8WV44 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
TRIM41Q8WV44 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
TRIM41Q8WV44 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
TRIM41Q8WV44 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC31.26■■■□□ 2.59
TRIM41Q8WV44 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC31.26■■■□□ 2.59
TRIM41Q8WV44 COBL-210ENST00000632460 1941 ntTSL 5 BASIC31.26■■■□□ 2.59
TRIM41Q8WV44 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
TRIM41Q8WV44 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC31.25■■■□□ 2.59
TRIM41Q8WV44 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC31.25■■■□□ 2.59
TRIM41Q8WV44 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC31.25■■■□□ 2.59
TRIM41Q8WV44 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
TRIM41Q8WV44 AL499627.1-201ENST00000569373 2188 ntBASIC31.25■■■□□ 2.59
TRIM41Q8WV44 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC31.25■■■□□ 2.59
TRIM41Q8WV44 AC005034.1-201ENST00000426657 489 ntBASIC31.25■■■□□ 2.59
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms