Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
ALMS1Q8TCU4 AC097374.2-201ENST00000618617 1306 ntBASIC12.27□□□□□ -0.44
ALMS1Q8TCU4 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
ALMS1Q8TCU4 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
ALMS1Q8TCU4 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
ALMS1Q8TCU4 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
ALMS1Q8TCU4 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
ALMS1Q8TCU4 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC12.27□□□□□ -0.44
ALMS1Q8TCU4 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC12.27□□□□□ -0.44
ALMS1Q8TCU4 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC12.27□□□□□ -0.44
ALMS1Q8TCU4 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
ALMS1Q8TCU4 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
ALMS1Q8TCU4 USP39-204ENST00000409766 2033 ntTSL 2 BASIC12.27□□□□□ -0.44
ALMS1Q8TCU4 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC12.27□□□□□ -0.44
ALMS1Q8TCU4 UBQLN4P1-201ENST00000461599 1801 ntBASIC12.27□□□□□ -0.44
ALMS1Q8TCU4 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
ALMS1Q8TCU4 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
ALMS1Q8TCU4 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ALMS1Q8TCU4 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ALMS1Q8TCU4 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
ALMS1Q8TCU4 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
ALMS1Q8TCU4 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC12.27□□□□□ -0.45
ALMS1Q8TCU4 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC12.27□□□□□ -0.45
ALMS1Q8TCU4 AC006557.2-201ENST00000592985 1240 ntBASIC12.27□□□□□ -0.45
ALMS1Q8TCU4 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
ALMS1Q8TCU4 CITED2-204ENST00000618718 901 ntTSL 2 BASIC12.27□□□□□ -0.45
ALMS1Q8TCU4 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
ALMS1Q8TCU4 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
ALMS1Q8TCU4 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ALMS1Q8TCU4 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ALMS1Q8TCU4 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC12.27□□□□□ -0.45
ALMS1Q8TCU4 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
ALMS1Q8TCU4 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
ALMS1Q8TCU4 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC12.27□□□□□ -0.45
ALMS1Q8TCU4 AC004817.3-201ENST00000602957 2129 ntBASIC12.27□□□□□ -0.45
ALMS1Q8TCU4 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC12.27□□□□□ -0.45
ALMS1Q8TCU4 LBX2-AS1-202ENST00000603175 2083 ntBASIC12.27□□□□□ -0.45
ALMS1Q8TCU4 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ALMS1Q8TCU4 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
ALMS1Q8TCU4 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ALMS1Q8TCU4 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
ALMS1Q8TCU4 TSEN15P1-201ENST00000423257 515 ntBASIC12.26□□□□□ -0.45
ALMS1Q8TCU4 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC12.26□□□□□ -0.45
ALMS1Q8TCU4 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC12.26□□□□□ -0.45
ALMS1Q8TCU4 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC12.26□□□□□ -0.45
ALMS1Q8TCU4 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
ALMS1Q8TCU4 AC092667.1-201ENST00000434301 2586 ntBASIC12.26□□□□□ -0.45
ALMS1Q8TCU4 PWWP2AP1-201ENST00000429776 2273 ntBASIC12.26□□□□□ -0.45
ALMS1Q8TCU4 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
ALMS1Q8TCU4 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC12.26□□□□□ -0.45
ALMS1Q8TCU4 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ALMS1Q8TCU4 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC12.26□□□□□ -0.45
ALMS1Q8TCU4 AC007967.3-201ENST00000434308 558 ntBASIC12.26□□□□□ -0.45
ALMS1Q8TCU4 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
ALMS1Q8TCU4 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC12.26□□□□□ -0.45
ALMS1Q8TCU4 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC12.26□□□□□ -0.45
ALMS1Q8TCU4 AL513210.1-201ENST00000629608 234 ntBASIC12.26□□□□□ -0.45
ALMS1Q8TCU4 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
ALMS1Q8TCU4 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ALMS1Q8TCU4 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
ALMS1Q8TCU4 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ALMS1Q8TCU4 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC12.26□□□□□ -0.45
ALMS1Q8TCU4 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ALMS1Q8TCU4 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC12.26□□□□□ -0.45
ALMS1Q8TCU4 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ALMS1Q8TCU4 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
ALMS1Q8TCU4 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ALMS1Q8TCU4 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC12.26□□□□□ -0.45
ALMS1Q8TCU4 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ALMS1Q8TCU4 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ALMS1Q8TCU4 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ALMS1Q8TCU4 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
ALMS1Q8TCU4 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
ALMS1Q8TCU4 C20orf181-201ENST00000623918 480 ntBASIC12.26□□□□□ -0.45
ALMS1Q8TCU4 AL035252.4-201ENST00000624174 288 ntBASIC12.26□□□□□ -0.45
ALMS1Q8TCU4 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC12.26□□□□□ -0.45
ALMS1Q8TCU4 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
ALMS1Q8TCU4 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
ALMS1Q8TCU4 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ALMS1Q8TCU4 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ALMS1Q8TCU4 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ALMS1Q8TCU4 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC12.26□□□□□ -0.45
ALMS1Q8TCU4 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
ALMS1Q8TCU4 TCAP-202ENST00000578283 583 ntTSL 5 BASIC12.26□□□□□ -0.45
ALMS1Q8TCU4 AC004706.3-202ENST00000621574 984 ntBASIC12.26□□□□□ -0.45
ALMS1Q8TCU4 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC12.25□□□□□ -0.45
ALMS1Q8TCU4 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC12.25□□□□□ -0.45
ALMS1Q8TCU4 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC12.25□□□□□ -0.45
ALMS1Q8TCU4 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
ALMS1Q8TCU4 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
ALMS1Q8TCU4 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ALMS1Q8TCU4 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ALMS1Q8TCU4 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC12.25□□□□□ -0.45
ALMS1Q8TCU4 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ALMS1Q8TCU4 BAD-202ENST00000394531 631 ntTSL 3 BASIC12.25□□□□□ -0.45
ALMS1Q8TCU4 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC12.25□□□□□ -0.45
ALMS1Q8TCU4 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ALMS1Q8TCU4 AC007274.1-201ENST00000439805 662 ntBASIC12.25□□□□□ -0.45
ALMS1Q8TCU4 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC12.25□□□□□ -0.45
ALMS1Q8TCU4 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms