Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RAB3IL1Q8TBN0 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.28■□□□□ 0.52
RAB3IL1Q8TBN0 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RAB3IL1Q8TBN0 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RAB3IL1Q8TBN0 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RAB3IL1Q8TBN0 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.28■□□□□ 0.52
RAB3IL1Q8TBN0 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
RAB3IL1Q8TBN0 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RAB3IL1Q8TBN0 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
RAB3IL1Q8TBN0 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RAB3IL1Q8TBN0 AC139713.2-201ENST00000641328 2723 ntBASIC18.28■□□□□ 0.52
RAB3IL1Q8TBN0 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RAB3IL1Q8TBN0 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RAB3IL1Q8TBN0 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RAB3IL1Q8TBN0 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RAB3IL1Q8TBN0 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RAB3IL1Q8TBN0 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
RAB3IL1Q8TBN0 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RAB3IL1Q8TBN0 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RAB3IL1Q8TBN0 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RAB3IL1Q8TBN0 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RAB3IL1Q8TBN0 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RAB3IL1Q8TBN0 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.27■□□□□ 0.52
RAB3IL1Q8TBN0 AL138781.1-201ENST00000566567 1274 ntBASIC18.27■□□□□ 0.52
RAB3IL1Q8TBN0 AC142086.2-201ENST00000569753 217 ntBASIC18.27■□□□□ 0.52
RAB3IL1Q8TBN0 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.27■□□□□ 0.52
RAB3IL1Q8TBN0 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
RAB3IL1Q8TBN0 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
RAB3IL1Q8TBN0 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.27■□□□□ 0.52
RAB3IL1Q8TBN0 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RAB3IL1Q8TBN0 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
RAB3IL1Q8TBN0 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RAB3IL1Q8TBN0 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
RAB3IL1Q8TBN0 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
RAB3IL1Q8TBN0 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.27■□□□□ 0.51
RAB3IL1Q8TBN0 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RAB3IL1Q8TBN0 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RAB3IL1Q8TBN0 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
RAB3IL1Q8TBN0 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAB3IL1Q8TBN0 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.26■□□□□ 0.51
RAB3IL1Q8TBN0 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RAB3IL1Q8TBN0 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RAB3IL1Q8TBN0 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAB3IL1Q8TBN0 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
RAB3IL1Q8TBN0 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAB3IL1Q8TBN0 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.26■□□□□ 0.51
RAB3IL1Q8TBN0 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAB3IL1Q8TBN0 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAB3IL1Q8TBN0 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RAB3IL1Q8TBN0 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAB3IL1Q8TBN0 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
RAB3IL1Q8TBN0 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAB3IL1Q8TBN0 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.26■□□□□ 0.51
RAB3IL1Q8TBN0 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC18.26■□□□□ 0.51
RAB3IL1Q8TBN0 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.26■□□□□ 0.51
RAB3IL1Q8TBN0 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.26■□□□□ 0.51
RAB3IL1Q8TBN0 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RAB3IL1Q8TBN0 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
RAB3IL1Q8TBN0 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
RAB3IL1Q8TBN0 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.26■□□□□ 0.51
RAB3IL1Q8TBN0 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.26■□□□□ 0.51
RAB3IL1Q8TBN0 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.26■□□□□ 0.51
RAB3IL1Q8TBN0 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAB3IL1Q8TBN0 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RAB3IL1Q8TBN0 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RAB3IL1Q8TBN0 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.26■□□□□ 0.51
RAB3IL1Q8TBN0 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RAB3IL1Q8TBN0 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
RAB3IL1Q8TBN0 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RAB3IL1Q8TBN0 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.25■□□□□ 0.51
RAB3IL1Q8TBN0 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
RAB3IL1Q8TBN0 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAB3IL1Q8TBN0 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.25■□□□□ 0.51
RAB3IL1Q8TBN0 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.25■□□□□ 0.51
RAB3IL1Q8TBN0 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.25■□□□□ 0.51
RAB3IL1Q8TBN0 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
RAB3IL1Q8TBN0 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
RAB3IL1Q8TBN0 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.25■□□□□ 0.51
RAB3IL1Q8TBN0 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAB3IL1Q8TBN0 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAB3IL1Q8TBN0 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.25■□□□□ 0.51
RAB3IL1Q8TBN0 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.25■□□□□ 0.51
RAB3IL1Q8TBN0 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAB3IL1Q8TBN0 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAB3IL1Q8TBN0 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAB3IL1Q8TBN0 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAB3IL1Q8TBN0 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
RAB3IL1Q8TBN0 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
RAB3IL1Q8TBN0 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.25■□□□□ 0.51
RAB3IL1Q8TBN0 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
RAB3IL1Q8TBN0 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.25■□□□□ 0.51
RAB3IL1Q8TBN0 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.25■□□□□ 0.51
RAB3IL1Q8TBN0 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
RAB3IL1Q8TBN0 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAB3IL1Q8TBN0 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAB3IL1Q8TBN0 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAB3IL1Q8TBN0 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAB3IL1Q8TBN0 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAB3IL1Q8TBN0 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.24■□□□□ 0.51
RAB3IL1Q8TBN0 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms