Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SMARCC2Q8TAQ2 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SMARCC2Q8TAQ2 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
SMARCC2Q8TAQ2 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC21.46■■□□□ 1.03
SMARCC2Q8TAQ2 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC21.46■■□□□ 1.03
SMARCC2Q8TAQ2 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC21.46■■□□□ 1.03
SMARCC2Q8TAQ2 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC21.46■■□□□ 1.03
SMARCC2Q8TAQ2 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SMARCC2Q8TAQ2 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
SMARCC2Q8TAQ2 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC21.46■■□□□ 1.03
SMARCC2Q8TAQ2 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC21.46■■□□□ 1.03
SMARCC2Q8TAQ2 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC21.46■■□□□ 1.03
SMARCC2Q8TAQ2 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
SMARCC2Q8TAQ2 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SMARCC2Q8TAQ2 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
SMARCC2Q8TAQ2 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
SMARCC2Q8TAQ2 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SMARCC2Q8TAQ2 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SMARCC2Q8TAQ2 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SMARCC2Q8TAQ2 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SMARCC2Q8TAQ2 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.03
SMARCC2Q8TAQ2 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC21.45■■□□□ 1.02
SMARCC2Q8TAQ2 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC21.45■■□□□ 1.02
SMARCC2Q8TAQ2 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SMARCC2Q8TAQ2 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC21.45■■□□□ 1.02
SMARCC2Q8TAQ2 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SMARCC2Q8TAQ2 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC21.45■■□□□ 1.02
SMARCC2Q8TAQ2 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC21.45■■□□□ 1.02
SMARCC2Q8TAQ2 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC21.45■■□□□ 1.02
SMARCC2Q8TAQ2 ETFA-216ENST00000560726 942 ntTSL 3 BASIC21.45■■□□□ 1.02
SMARCC2Q8TAQ2 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC21.45■■□□□ 1.02
SMARCC2Q8TAQ2 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC21.45■■□□□ 1.02
SMARCC2Q8TAQ2 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
SMARCC2Q8TAQ2 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SMARCC2Q8TAQ2 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
SMARCC2Q8TAQ2 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SMARCC2Q8TAQ2 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC21.45■■□□□ 1.02
SMARCC2Q8TAQ2 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
SMARCC2Q8TAQ2 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC21.45■■□□□ 1.02
SMARCC2Q8TAQ2 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SMARCC2Q8TAQ2 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SMARCC2Q8TAQ2 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SMARCC2Q8TAQ2 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC21.44■■□□□ 1.02
SMARCC2Q8TAQ2 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
SMARCC2Q8TAQ2 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
SMARCC2Q8TAQ2 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC21.44■■□□□ 1.02
SMARCC2Q8TAQ2 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
SMARCC2Q8TAQ2 MIR149-201ENST00000384879 89 ntBASIC21.44■■□□□ 1.02
SMARCC2Q8TAQ2 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC21.44■■□□□ 1.02
SMARCC2Q8TAQ2 KRT18P23-201ENST00000435622 1283 ntBASIC21.44■■□□□ 1.02
SMARCC2Q8TAQ2 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SMARCC2Q8TAQ2 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SMARCC2Q8TAQ2 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
SMARCC2Q8TAQ2 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SMARCC2Q8TAQ2 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SMARCC2Q8TAQ2 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SMARCC2Q8TAQ2 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SMARCC2Q8TAQ2 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SMARCC2Q8TAQ2 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SMARCC2Q8TAQ2 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SMARCC2Q8TAQ2 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC21.44■■□□□ 1.02
SMARCC2Q8TAQ2 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
SMARCC2Q8TAQ2 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
SMARCC2Q8TAQ2 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
SMARCC2Q8TAQ2 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SMARCC2Q8TAQ2 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SMARCC2Q8TAQ2 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC21.43■■□□□ 1.02
SMARCC2Q8TAQ2 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
SMARCC2Q8TAQ2 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC21.43■■□□□ 1.02
SMARCC2Q8TAQ2 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SMARCC2Q8TAQ2 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SMARCC2Q8TAQ2 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SMARCC2Q8TAQ2 AC099343.3-201ENST00000605834 2503 ntBASIC21.43■■□□□ 1.02
SMARCC2Q8TAQ2 FAM8A6P-201ENST00000407496 1135 ntBASIC21.43■■□□□ 1.02
SMARCC2Q8TAQ2 HOMER2P1-201ENST00000455653 964 ntBASIC21.43■■□□□ 1.02
SMARCC2Q8TAQ2 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SMARCC2Q8TAQ2 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC21.43■■□□□ 1.02
SMARCC2Q8TAQ2 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC21.43■■□□□ 1.02
SMARCC2Q8TAQ2 GCSHP2-201ENST00000560971 527 ntBASIC21.43■■□□□ 1.02
SMARCC2Q8TAQ2 AC087388.1-201ENST00000571370 1112 ntBASIC21.43■■□□□ 1.02
SMARCC2Q8TAQ2 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SMARCC2Q8TAQ2 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SMARCC2Q8TAQ2 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC21.43■■□□□ 1.02
SMARCC2Q8TAQ2 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SMARCC2Q8TAQ2 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC21.43■■□□□ 1.02
SMARCC2Q8TAQ2 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
SMARCC2Q8TAQ2 GMCL1P1-201ENST00000463439 1581 ntBASIC21.43■■□□□ 1.02
SMARCC2Q8TAQ2 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
SMARCC2Q8TAQ2 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SMARCC2Q8TAQ2 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC21.43■■□□□ 1.02
SMARCC2Q8TAQ2 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC21.43■■□□□ 1.02
SMARCC2Q8TAQ2 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC21.43■■□□□ 1.02
SMARCC2Q8TAQ2 PHGDH-209ENST00000641074 1780 ntBASIC21.43■■□□□ 1.02
SMARCC2Q8TAQ2 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SMARCC2Q8TAQ2 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SMARCC2Q8TAQ2 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
SMARCC2Q8TAQ2 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SMARCC2Q8TAQ2 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SMARCC2Q8TAQ2 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SMARCC2Q8TAQ2 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms