Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
NUP35Q8NFH5 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC13.71□□□□□ -0.22
NUP35Q8NFH5 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
NUP35Q8NFH5 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
NUP35Q8NFH5 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
NUP35Q8NFH5 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NUP35Q8NFH5 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NUP35Q8NFH5 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC13.7□□□□□ -0.22
NUP35Q8NFH5 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
NUP35Q8NFH5 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
NUP35Q8NFH5 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NUP35Q8NFH5 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NUP35Q8NFH5 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC13.7□□□□□ -0.22
NUP35Q8NFH5 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC13.7□□□□□ -0.22
NUP35Q8NFH5 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NUP35Q8NFH5 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
NUP35Q8NFH5 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NUP35Q8NFH5 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NUP35Q8NFH5 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NUP35Q8NFH5 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC13.7□□□□□ -0.22
NUP35Q8NFH5 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NUP35Q8NFH5 LSM12P1-201ENST00000411836 588 ntBASIC13.7□□□□□ -0.22
NUP35Q8NFH5 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC13.7□□□□□ -0.22
NUP35Q8NFH5 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC13.7□□□□□ -0.22
NUP35Q8NFH5 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC13.7□□□□□ -0.22
NUP35Q8NFH5 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC13.7□□□□□ -0.22
NUP35Q8NFH5 RAP2CP1-201ENST00000605103 478 ntBASIC13.7□□□□□ -0.22
NUP35Q8NFH5 AC005837.3-201ENST00000612163 286 ntBASIC13.7□□□□□ -0.22
NUP35Q8NFH5 OR10C1-204ENST00000622521 1039 ntBASIC13.7□□□□□ -0.22
NUP35Q8NFH5 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
NUP35Q8NFH5 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
NUP35Q8NFH5 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NUP35Q8NFH5 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
NUP35Q8NFH5 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NUP35Q8NFH5 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NUP35Q8NFH5 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NUP35Q8NFH5 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
NUP35Q8NFH5 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
NUP35Q8NFH5 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
NUP35Q8NFH5 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
NUP35Q8NFH5 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
NUP35Q8NFH5 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NUP35Q8NFH5 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NUP35Q8NFH5 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NUP35Q8NFH5 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC13.7□□□□□ -0.22
NUP35Q8NFH5 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
NUP35Q8NFH5 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NUP35Q8NFH5 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
NUP35Q8NFH5 CICP6-201ENST00000457191 2729 ntBASIC13.7□□□□□ -0.22
NUP35Q8NFH5 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
NUP35Q8NFH5 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NUP35Q8NFH5 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
NUP35Q8NFH5 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NUP35Q8NFH5 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NUP35Q8NFH5 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC13.69□□□□□ -0.22
NUP35Q8NFH5 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NUP35Q8NFH5 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC13.69□□□□□ -0.22
NUP35Q8NFH5 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
NUP35Q8NFH5 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NUP35Q8NFH5 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NUP35Q8NFH5 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
NUP35Q8NFH5 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NUP35Q8NFH5 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC13.69□□□□□ -0.22
NUP35Q8NFH5 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
NUP35Q8NFH5 GGT1-206ENST00000404223 952 ntTSL 2 BASIC13.69□□□□□ -0.22
NUP35Q8NFH5 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
NUP35Q8NFH5 DUX4L16-201ENST00000555130 1264 ntBASIC13.69□□□□□ -0.22
NUP35Q8NFH5 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC13.69□□□□□ -0.22
NUP35Q8NFH5 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NUP35Q8NFH5 AL160286.2-201ENST00000567150 934 ntBASIC13.69□□□□□ -0.22
NUP35Q8NFH5 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
NUP35Q8NFH5 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NUP35Q8NFH5 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NUP35Q8NFH5 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC13.69□□□□□ -0.22
NUP35Q8NFH5 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NUP35Q8NFH5 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NUP35Q8NFH5 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
NUP35Q8NFH5 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NUP35Q8NFH5 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC13.69□□□□□ -0.22
NUP35Q8NFH5 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NUP35Q8NFH5 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NUP35Q8NFH5 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
NUP35Q8NFH5 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
NUP35Q8NFH5 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC13.69□□□□□ -0.22
NUP35Q8NFH5 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NUP35Q8NFH5 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
NUP35Q8NFH5 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NUP35Q8NFH5 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NUP35Q8NFH5 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NUP35Q8NFH5 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC13.68□□□□□ -0.22
NUP35Q8NFH5 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
NUP35Q8NFH5 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
NUP35Q8NFH5 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC13.68□□□□□ -0.22
NUP35Q8NFH5 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NUP35Q8NFH5 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
NUP35Q8NFH5 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
NUP35Q8NFH5 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC13.68□□□□□ -0.22
NUP35Q8NFH5 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
NUP35Q8NFH5 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NUP35Q8NFH5 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms