Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC22.5■■□□□ 1.19
RTL9Q8NET4 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC22.5■■□□□ 1.19
RTL9Q8NET4 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC22.5■■□□□ 1.19
RTL9Q8NET4 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC22.5■■□□□ 1.19
RTL9Q8NET4 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RTL9Q8NET4 AL138831.2-201ENST00000606564 490 ntBASIC22.5■■□□□ 1.19
RTL9Q8NET4 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
RTL9Q8NET4 AC120114.3-201ENST00000611923 658 ntBASIC22.5■■□□□ 1.19
RTL9Q8NET4 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RTL9Q8NET4 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RTL9Q8NET4 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
RTL9Q8NET4 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC22.49■■□□□ 1.19
RTL9Q8NET4 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
RTL9Q8NET4 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RTL9Q8NET4 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
RTL9Q8NET4 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RTL9Q8NET4 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC22.49■■□□□ 1.19
RTL9Q8NET4 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RTL9Q8NET4 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RTL9Q8NET4 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC22.49■■□□□ 1.19
RTL9Q8NET4 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
RTL9Q8NET4 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
RTL9Q8NET4 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC22.49■■□□□ 1.19
RTL9Q8NET4 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
RTL9Q8NET4 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RTL9Q8NET4 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RTL9Q8NET4 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
RTL9Q8NET4 KRT18P65-201ENST00000439811 1286 ntBASIC22.49■■□□□ 1.19
RTL9Q8NET4 AC096582.2-201ENST00000510860 516 ntBASIC22.49■■□□□ 1.19
RTL9Q8NET4 AF238378.1-201ENST00000526806 358 ntBASIC22.49■■□□□ 1.19
RTL9Q8NET4 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC22.49■■□□□ 1.19
RTL9Q8NET4 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
RTL9Q8NET4 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
RTL9Q8NET4 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RTL9Q8NET4 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RTL9Q8NET4 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC22.48■■□□□ 1.19
RTL9Q8NET4 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC22.48■■□□□ 1.19
RTL9Q8NET4 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
RTL9Q8NET4 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC22.48■■□□□ 1.19
RTL9Q8NET4 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC22.48■■□□□ 1.19
RTL9Q8NET4 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
RTL9Q8NET4 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC22.48■■□□□ 1.19
RTL9Q8NET4 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC22.48■■□□□ 1.19
RTL9Q8NET4 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC22.48■■□□□ 1.19
RTL9Q8NET4 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC22.48■■□□□ 1.19
RTL9Q8NET4 BX640515.1-201ENST00000617215 977 ntBASIC22.48■■□□□ 1.19
RTL9Q8NET4 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
RTL9Q8NET4 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RTL9Q8NET4 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
RTL9Q8NET4 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RTL9Q8NET4 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RTL9Q8NET4 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC22.47■■□□□ 1.19
RTL9Q8NET4 AL031598.1-201ENST00000561511 1773 ntBASIC22.47■■□□□ 1.19
RTL9Q8NET4 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC22.47■■□□□ 1.19
RTL9Q8NET4 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
RTL9Q8NET4 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RTL9Q8NET4 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC22.47■■□□□ 1.19
RTL9Q8NET4 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RTL9Q8NET4 TEX30-205ENST00000376029 959 ntTSL 2 BASIC22.47■■□□□ 1.19
RTL9Q8NET4 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC22.47■■□□□ 1.19
RTL9Q8NET4 MTCL1P1-201ENST00000446207 792 ntBASIC22.47■■□□□ 1.19
RTL9Q8NET4 MEG3-211ENST00000452514 461 ntTSL 3 BASIC22.47■■□□□ 1.19
RTL9Q8NET4 PPIE-208ENST00000470213 927 ntTSL 3 BASIC22.47■■□□□ 1.19
RTL9Q8NET4 PENK-208ENST00000523051 772 ntTSL 5 BASIC22.47■■□□□ 1.19
RTL9Q8NET4 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC22.47■■□□□ 1.19
RTL9Q8NET4 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC22.47■■□□□ 1.19
RTL9Q8NET4 MIR5100-201ENST00000579544 119 ntBASIC22.47■■□□□ 1.19
RTL9Q8NET4 NME4-212ENST00000621774 904 ntTSL 3 BASIC22.47■■□□□ 1.19
RTL9Q8NET4 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
RTL9Q8NET4 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RTL9Q8NET4 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC22.47■■□□□ 1.19
RTL9Q8NET4 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC22.47■■□□□ 1.19
RTL9Q8NET4 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RTL9Q8NET4 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
RTL9Q8NET4 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RTL9Q8NET4 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RTL9Q8NET4 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
RTL9Q8NET4 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC22.46■■□□□ 1.19
RTL9Q8NET4 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC22.46■■□□□ 1.19
RTL9Q8NET4 KIRREL3-AS3-201ENST00000404882 831 ntBASIC22.46■■□□□ 1.19
RTL9Q8NET4 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
RTL9Q8NET4 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC22.46■■□□□ 1.19
RTL9Q8NET4 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
RTL9Q8NET4 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RTL9Q8NET4 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RTL9Q8NET4 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC22.46■■□□□ 1.19
RTL9Q8NET4 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
RTL9Q8NET4 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC22.45■■□□□ 1.18
RTL9Q8NET4 AC099343.3-201ENST00000605834 2503 ntBASIC22.45■■□□□ 1.18
RTL9Q8NET4 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
RTL9Q8NET4 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
RTL9Q8NET4 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RTL9Q8NET4 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
RTL9Q8NET4 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RTL9Q8NET4 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RTL9Q8NET4 DANCR-204ENST00000444958 709 ntTSL 3 BASIC22.45■■□□□ 1.18
RTL9Q8NET4 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RTL9Q8NET4 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RTL9Q8NET4 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC22.45■■□□□ 1.18
RTL9Q8NET4 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC22.45■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms