Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LINC01555Q8NAE3 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LINC01555Q8NAE3 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.6■□□□□ 0.41
LINC01555Q8NAE3 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
LINC01555Q8NAE3 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LINC01555Q8NAE3 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
LINC01555Q8NAE3 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
LINC01555Q8NAE3 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LINC01555Q8NAE3 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LINC01555Q8NAE3 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LINC01555Q8NAE3 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.59■□□□□ 0.41
LINC01555Q8NAE3 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LINC01555Q8NAE3 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LINC01555Q8NAE3 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.59■□□□□ 0.41
LINC01555Q8NAE3 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
LINC01555Q8NAE3 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LINC01555Q8NAE3 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.59■□□□□ 0.41
LINC01555Q8NAE3 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
LINC01555Q8NAE3 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LINC01555Q8NAE3 AC113404.2-201ENST00000507884 177 ntBASIC17.59■□□□□ 0.41
LINC01555Q8NAE3 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.59■□□□□ 0.41
LINC01555Q8NAE3 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.59■□□□□ 0.41
LINC01555Q8NAE3 GPR32P1-201ENST00000601788 811 ntBASIC17.59■□□□□ 0.41
LINC01555Q8NAE3 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.59■□□□□ 0.41
LINC01555Q8NAE3 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.59■□□□□ 0.41
LINC01555Q8NAE3 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.59■□□□□ 0.41
LINC01555Q8NAE3 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.59■□□□□ 0.41
LINC01555Q8NAE3 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
LINC01555Q8NAE3 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LINC01555Q8NAE3 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
LINC01555Q8NAE3 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
LINC01555Q8NAE3 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
LINC01555Q8NAE3 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
LINC01555Q8NAE3 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
LINC01555Q8NAE3 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
LINC01555Q8NAE3 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LINC01555Q8NAE3 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LINC01555Q8NAE3 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
LINC01555Q8NAE3 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
LINC01555Q8NAE3 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LINC01555Q8NAE3 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
LINC01555Q8NAE3 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LINC01555Q8NAE3 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.58■□□□□ 0.4
LINC01555Q8NAE3 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LINC01555Q8NAE3 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LINC01555Q8NAE3 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.58■□□□□ 0.4
LINC01555Q8NAE3 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.58■□□□□ 0.4
LINC01555Q8NAE3 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LINC01555Q8NAE3 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.58■□□□□ 0.4
LINC01555Q8NAE3 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.58■□□□□ 0.4
LINC01555Q8NAE3 AC008687.5-201ENST00000593746 558 ntBASIC17.58■□□□□ 0.4
LINC01555Q8NAE3 AC004263.2-201ENST00000617183 678 ntBASIC17.58■□□□□ 0.4
LINC01555Q8NAE3 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.58■□□□□ 0.4
LINC01555Q8NAE3 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
LINC01555Q8NAE3 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
LINC01555Q8NAE3 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LINC01555Q8NAE3 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
LINC01555Q8NAE3 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LINC01555Q8NAE3 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LINC01555Q8NAE3 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LINC01555Q8NAE3 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
LINC01555Q8NAE3 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LINC01555Q8NAE3 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
LINC01555Q8NAE3 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
LINC01555Q8NAE3 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
LINC01555Q8NAE3 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.57■□□□□ 0.4
LINC01555Q8NAE3 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LINC01555Q8NAE3 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LINC01555Q8NAE3 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LINC01555Q8NAE3 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LINC01555Q8NAE3 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.57■□□□□ 0.4
LINC01555Q8NAE3 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LINC01555Q8NAE3 TSPY22P-201ENST00000427496 604 ntBASIC17.57■□□□□ 0.4
LINC01555Q8NAE3 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.57■□□□□ 0.4
LINC01555Q8NAE3 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.57■□□□□ 0.4
LINC01555Q8NAE3 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.57■□□□□ 0.4
LINC01555Q8NAE3 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.57■□□□□ 0.4
LINC01555Q8NAE3 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.57■□□□□ 0.4
LINC01555Q8NAE3 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LINC01555Q8NAE3 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.57■□□□□ 0.4
LINC01555Q8NAE3 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.57■□□□□ 0.4
LINC01555Q8NAE3 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
LINC01555Q8NAE3 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LINC01555Q8NAE3 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LINC01555Q8NAE3 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LINC01555Q8NAE3 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
LINC01555Q8NAE3 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LINC01555Q8NAE3 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.57■□□□□ 0.4
LINC01555Q8NAE3 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
LINC01555Q8NAE3 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
LINC01555Q8NAE3 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LINC01555Q8NAE3 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
LINC01555Q8NAE3 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LINC01555Q8NAE3 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
LINC01555Q8NAE3 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
LINC01555Q8NAE3 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LINC01555Q8NAE3 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.56■□□□□ 0.4
LINC01555Q8NAE3 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
LINC01555Q8NAE3 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
LINC01555Q8NAE3 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms