Protein–RNA interactions for Protein: Q8N7C3

TRIML2, Probable E3 ubiquitin-protein ligase TRIML2, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML2Q8N7C3 LINC00896-202ENST00000609602 2128 ntBASIC17.73■□□□□ 0.43
TRIML2Q8N7C3 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
TRIML2Q8N7C3 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRIML2Q8N7C3 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIML2Q8N7C3 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIML2Q8N7C3 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.73■□□□□ 0.43
TRIML2Q8N7C3 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIML2Q8N7C3 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIML2Q8N7C3 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
TRIML2Q8N7C3 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.73■□□□□ 0.43
TRIML2Q8N7C3 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
TRIML2Q8N7C3 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.73■□□□□ 0.43
TRIML2Q8N7C3 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIML2Q8N7C3 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
TRIML2Q8N7C3 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRIML2Q8N7C3 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
TRIML2Q8N7C3 KRT8P3-201ENST00000519669 1449 ntBASIC17.72■□□□□ 0.43
TRIML2Q8N7C3 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIML2Q8N7C3 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRIML2Q8N7C3 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.72■□□□□ 0.43
TRIML2Q8N7C3 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIML2Q8N7C3 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIML2Q8N7C3 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRIML2Q8N7C3 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.72■□□□□ 0.43
TRIML2Q8N7C3 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIML2Q8N7C3 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIML2Q8N7C3 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIML2Q8N7C3 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.72■□□□□ 0.43
TRIML2Q8N7C3 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
TRIML2Q8N7C3 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIML2Q8N7C3 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.72■□□□□ 0.43
TRIML2Q8N7C3 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIML2Q8N7C3 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIML2Q8N7C3 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRIML2Q8N7C3 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIML2Q8N7C3 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIML2Q8N7C3 AC004980.1-204ENST00000429707 299 ntBASIC17.72■□□□□ 0.43
TRIML2Q8N7C3 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.72■□□□□ 0.43
TRIML2Q8N7C3 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.72■□□□□ 0.43
TRIML2Q8N7C3 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIML2Q8N7C3 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
TRIML2Q8N7C3 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.72■□□□□ 0.43
TRIML2Q8N7C3 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.72■□□□□ 0.43
TRIML2Q8N7C3 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.72■□□□□ 0.43
TRIML2Q8N7C3 AC084018.2-201ENST00000613093 2607 ntBASIC17.72■□□□□ 0.43
TRIML2Q8N7C3 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.72■□□□□ 0.43
TRIML2Q8N7C3 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIML2Q8N7C3 AC126763.1-201ENST00000552015 2118 ntBASIC17.72■□□□□ 0.43
TRIML2Q8N7C3 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.72■□□□□ 0.43
TRIML2Q8N7C3 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIML2Q8N7C3 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.72■□□□□ 0.43
TRIML2Q8N7C3 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRIML2Q8N7C3 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIML2Q8N7C3 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.72■□□□□ 0.43
TRIML2Q8N7C3 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRIML2Q8N7C3 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRIML2Q8N7C3 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIML2Q8N7C3 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIML2Q8N7C3 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIML2Q8N7C3 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
TRIML2Q8N7C3 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
TRIML2Q8N7C3 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIML2Q8N7C3 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIML2Q8N7C3 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.71■□□□□ 0.43
TRIML2Q8N7C3 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRIML2Q8N7C3 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
TRIML2Q8N7C3 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
TRIML2Q8N7C3 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRIML2Q8N7C3 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIML2Q8N7C3 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIML2Q8N7C3 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRIML2Q8N7C3 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.71■□□□□ 0.43
TRIML2Q8N7C3 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRIML2Q8N7C3 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.71■□□□□ 0.43
TRIML2Q8N7C3 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRIML2Q8N7C3 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.71■□□□□ 0.43
TRIML2Q8N7C3 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.71■□□□□ 0.43
TRIML2Q8N7C3 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.71■□□□□ 0.43
TRIML2Q8N7C3 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIML2Q8N7C3 ADM-205ENST00000528544 586 ntTSL 2 BASIC17.71■□□□□ 0.43
TRIML2Q8N7C3 AC006058.3-201ENST00000606217 1069 ntBASIC17.71■□□□□ 0.43
TRIML2Q8N7C3 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.71■□□□□ 0.43
TRIML2Q8N7C3 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.71■□□□□ 0.43
TRIML2Q8N7C3 AC068587.9-201ENST00000641814 219 ntBASIC17.71■□□□□ 0.43
TRIML2Q8N7C3 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIML2Q8N7C3 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.71■□□□□ 0.43
TRIML2Q8N7C3 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRIML2Q8N7C3 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
TRIML2Q8N7C3 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.71■□□□□ 0.43
TRIML2Q8N7C3 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRIML2Q8N7C3 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRIML2Q8N7C3 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRIML2Q8N7C3 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
TRIML2Q8N7C3 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIML2Q8N7C3 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
TRIML2Q8N7C3 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
TRIML2Q8N7C3 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.71■□□□□ 0.42
TRIML2Q8N7C3 HTR7P1-201ENST00000538670 1336 ntBASIC17.71■□□□□ 0.42
TRIML2Q8N7C3 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
TRIML2Q8N7C3 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms