Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TTC39CQ8N584 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.44■□□□□ 0.7
TTC39CQ8N584 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.44■□□□□ 0.7
TTC39CQ8N584 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.44■□□□□ 0.7
TTC39CQ8N584 AL031133.1-201ENST00000406807 723 ntBASIC19.44■□□□□ 0.7
TTC39CQ8N584 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TTC39CQ8N584 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.44■□□□□ 0.7
TTC39CQ8N584 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TTC39CQ8N584 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.44■□□□□ 0.7
TTC39CQ8N584 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.44■□□□□ 0.7
TTC39CQ8N584 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.44■□□□□ 0.7
TTC39CQ8N584 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TTC39CQ8N584 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.44■□□□□ 0.7
TTC39CQ8N584 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.44■□□□□ 0.7
TTC39CQ8N584 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TTC39CQ8N584 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TTC39CQ8N584 AC009113.1-201ENST00000570267 2443 ntBASIC19.44■□□□□ 0.7
TTC39CQ8N584 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TTC39CQ8N584 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TTC39CQ8N584 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TTC39CQ8N584 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
TTC39CQ8N584 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TTC39CQ8N584 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TTC39CQ8N584 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
TTC39CQ8N584 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
TTC39CQ8N584 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TTC39CQ8N584 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TTC39CQ8N584 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TTC39CQ8N584 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TTC39CQ8N584 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
TTC39CQ8N584 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TTC39CQ8N584 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TTC39CQ8N584 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
TTC39CQ8N584 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TTC39CQ8N584 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.43■□□□□ 0.7
TTC39CQ8N584 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.43■□□□□ 0.7
TTC39CQ8N584 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.43■□□□□ 0.7
TTC39CQ8N584 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.43■□□□□ 0.7
TTC39CQ8N584 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.43■□□□□ 0.7
TTC39CQ8N584 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.43■□□□□ 0.7
TTC39CQ8N584 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TTC39CQ8N584 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
TTC39CQ8N584 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TTC39CQ8N584 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TTC39CQ8N584 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
TTC39CQ8N584 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
TTC39CQ8N584 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TTC39CQ8N584 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TTC39CQ8N584 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
TTC39CQ8N584 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TTC39CQ8N584 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
TTC39CQ8N584 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
TTC39CQ8N584 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.42■□□□□ 0.7
TTC39CQ8N584 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TTC39CQ8N584 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
TTC39CQ8N584 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
TTC39CQ8N584 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TTC39CQ8N584 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TTC39CQ8N584 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TTC39CQ8N584 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TTC39CQ8N584 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.42■□□□□ 0.7
TTC39CQ8N584 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TTC39CQ8N584 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TTC39CQ8N584 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.42■□□□□ 0.7
TTC39CQ8N584 MIR1224-201ENST00000408193 85 ntBASIC19.42■□□□□ 0.7
TTC39CQ8N584 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TTC39CQ8N584 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.42■□□□□ 0.7
TTC39CQ8N584 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TTC39CQ8N584 AP003733.1-201ENST00000491725 852 ntBASIC19.42■□□□□ 0.7
TTC39CQ8N584 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.42■□□□□ 0.7
TTC39CQ8N584 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.42■□□□□ 0.7
TTC39CQ8N584 AC087388.1-201ENST00000571370 1112 ntBASIC19.42■□□□□ 0.7
TTC39CQ8N584 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.42■□□□□ 0.7
TTC39CQ8N584 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.42■□□□□ 0.7
TTC39CQ8N584 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TTC39CQ8N584 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TTC39CQ8N584 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TTC39CQ8N584 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
TTC39CQ8N584 BICD1-207ENST00000551848 1962 ntBASIC19.42■□□□□ 0.7
TTC39CQ8N584 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
TTC39CQ8N584 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TTC39CQ8N584 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TTC39CQ8N584 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.42■□□□□ 0.7
TTC39CQ8N584 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TTC39CQ8N584 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
TTC39CQ8N584 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TTC39CQ8N584 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TTC39CQ8N584 AC093010.1-201ENST00000473625 1624 ntBASIC19.41■□□□□ 0.7
TTC39CQ8N584 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TTC39CQ8N584 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
TTC39CQ8N584 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.41■□□□□ 0.7
TTC39CQ8N584 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.41■□□□□ 0.7
TTC39CQ8N584 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.41■□□□□ 0.7
TTC39CQ8N584 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.41■□□□□ 0.7
TTC39CQ8N584 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
TTC39CQ8N584 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
TTC39CQ8N584 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.41■□□□□ 0.7
TTC39CQ8N584 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
TTC39CQ8N584 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.41■□□□□ 0.7
TTC39CQ8N584 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms