Protein–RNA interactions for Protein: Q8N328

PGBD3, PiggyBac transposable element-derived protein 3, humanhuman

Predictions only

Length 593 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD3Q8N328 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
PGBD3Q8N328 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
PGBD3Q8N328 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PGBD3Q8N328 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.58■□□□□ 0.57
PGBD3Q8N328 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.57
PGBD3Q8N328 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PGBD3Q8N328 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PGBD3Q8N328 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PGBD3Q8N328 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PGBD3Q8N328 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.58■□□□□ 0.57
PGBD3Q8N328 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
PGBD3Q8N328 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
PGBD3Q8N328 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PGBD3Q8N328 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
PGBD3Q8N328 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PGBD3Q8N328 IGHGP-201ENST00000390555 1178 ntBASIC18.58■□□□□ 0.56
PGBD3Q8N328 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.58■□□□□ 0.56
PGBD3Q8N328 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.58■□□□□ 0.56
PGBD3Q8N328 AL592071.1-201ENST00000611956 408 ntBASIC18.58■□□□□ 0.56
PGBD3Q8N328 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PGBD3Q8N328 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
PGBD3Q8N328 HTR7P1-202ENST00000624664 4411 ntBASIC18.58■□□□□ 0.56
PGBD3Q8N328 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PGBD3Q8N328 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PGBD3Q8N328 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
PGBD3Q8N328 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
PGBD3Q8N328 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PGBD3Q8N328 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PGBD3Q8N328 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PGBD3Q8N328 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PGBD3Q8N328 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PGBD3Q8N328 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
PGBD3Q8N328 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
PGBD3Q8N328 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PGBD3Q8N328 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PGBD3Q8N328 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PGBD3Q8N328 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.57■□□□□ 0.56
PGBD3Q8N328 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PGBD3Q8N328 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PGBD3Q8N328 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.57■□□□□ 0.56
PGBD3Q8N328 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PGBD3Q8N328 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
PGBD3Q8N328 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.57■□□□□ 0.56
PGBD3Q8N328 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.57■□□□□ 0.56
PGBD3Q8N328 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.57■□□□□ 0.56
PGBD3Q8N328 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
PGBD3Q8N328 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PGBD3Q8N328 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
PGBD3Q8N328 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PGBD3Q8N328 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
PGBD3Q8N328 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.57■□□□□ 0.56
PGBD3Q8N328 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PGBD3Q8N328 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PGBD3Q8N328 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PGBD3Q8N328 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PGBD3Q8N328 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PGBD3Q8N328 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PGBD3Q8N328 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PGBD3Q8N328 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.56■□□□□ 0.56
PGBD3Q8N328 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
PGBD3Q8N328 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
PGBD3Q8N328 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
PGBD3Q8N328 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
PGBD3Q8N328 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.56■□□□□ 0.56
PGBD3Q8N328 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PGBD3Q8N328 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PGBD3Q8N328 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PGBD3Q8N328 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PGBD3Q8N328 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PGBD3Q8N328 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
PGBD3Q8N328 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.56■□□□□ 0.56
PGBD3Q8N328 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PGBD3Q8N328 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PGBD3Q8N328 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.56■□□□□ 0.56
PGBD3Q8N328 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PGBD3Q8N328 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
PGBD3Q8N328 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.56■□□□□ 0.56
PGBD3Q8N328 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.56■□□□□ 0.56
PGBD3Q8N328 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.56■□□□□ 0.56
PGBD3Q8N328 AC104692.2-201ENST00000603054 253 ntBASIC18.56■□□□□ 0.56
PGBD3Q8N328 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PGBD3Q8N328 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PGBD3Q8N328 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.56■□□□□ 0.56
PGBD3Q8N328 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.56■□□□□ 0.56
PGBD3Q8N328 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PGBD3Q8N328 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.56■□□□□ 0.56
PGBD3Q8N328 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PGBD3Q8N328 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
PGBD3Q8N328 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.56■□□□□ 0.56
PGBD3Q8N328 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PGBD3Q8N328 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
PGBD3Q8N328 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.56■□□□□ 0.56
PGBD3Q8N328 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.56■□□□□ 0.56
PGBD3Q8N328 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.56■□□□□ 0.56
PGBD3Q8N328 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PGBD3Q8N328 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.55■□□□□ 0.56
PGBD3Q8N328 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PGBD3Q8N328 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PGBD3Q8N328 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
PGBD3Q8N328 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms