Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SIX5Q8N196 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.58
SIX5Q8N196 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SIX5Q8N196 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SIX5Q8N196 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.7■□□□□ 0.58
SIX5Q8N196 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SIX5Q8N196 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SIX5Q8N196 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.7■□□□□ 0.58
SIX5Q8N196 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SIX5Q8N196 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SIX5Q8N196 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SIX5Q8N196 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.7■□□□□ 0.58
SIX5Q8N196 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SIX5Q8N196 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SIX5Q8N196 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SIX5Q8N196 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SIX5Q8N196 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.7■□□□□ 0.58
SIX5Q8N196 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.7■□□□□ 0.58
SIX5Q8N196 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
SIX5Q8N196 NMU-202ENST00000505262 693 ntTSL 3 BASIC18.7■□□□□ 0.58
SIX5Q8N196 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SIX5Q8N196 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.7■□□□□ 0.58
SIX5Q8N196 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC18.7■□□□□ 0.58
SIX5Q8N196 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.7■□□□□ 0.58
SIX5Q8N196 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.7■□□□□ 0.58
SIX5Q8N196 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC18.7■□□□□ 0.58
SIX5Q8N196 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
SIX5Q8N196 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
SIX5Q8N196 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SIX5Q8N196 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SIX5Q8N196 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SIX5Q8N196 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SIX5Q8N196 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SIX5Q8N196 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SIX5Q8N196 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SIX5Q8N196 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SIX5Q8N196 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SIX5Q8N196 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.69■□□□□ 0.58
SIX5Q8N196 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.69■□□□□ 0.58
SIX5Q8N196 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
SIX5Q8N196 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
SIX5Q8N196 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SIX5Q8N196 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SIX5Q8N196 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.69■□□□□ 0.58
SIX5Q8N196 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SIX5Q8N196 AC092910.1-201ENST00000482027 1129 ntBASIC18.69■□□□□ 0.58
SIX5Q8N196 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.69■□□□□ 0.58
SIX5Q8N196 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.69■□□□□ 0.58
SIX5Q8N196 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SIX5Q8N196 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.69■□□□□ 0.58
SIX5Q8N196 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SIX5Q8N196 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
SIX5Q8N196 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SIX5Q8N196 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.69■□□□□ 0.58
SIX5Q8N196 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SIX5Q8N196 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SIX5Q8N196 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SIX5Q8N196 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SIX5Q8N196 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SIX5Q8N196 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SIX5Q8N196 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SIX5Q8N196 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SIX5Q8N196 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.69■□□□□ 0.58
SIX5Q8N196 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SIX5Q8N196 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SIX5Q8N196 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
SIX5Q8N196 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SIX5Q8N196 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
SIX5Q8N196 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
SIX5Q8N196 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SIX5Q8N196 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SIX5Q8N196 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SIX5Q8N196 HLA-J-201ENST00000462773 1622 ntBASIC18.68■□□□□ 0.58
SIX5Q8N196 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.68■□□□□ 0.58
SIX5Q8N196 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.68■□□□□ 0.58
SIX5Q8N196 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SIX5Q8N196 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SIX5Q8N196 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
SIX5Q8N196 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.68■□□□□ 0.58
SIX5Q8N196 RPS2P1-201ENST00000434010 821 ntBASIC18.68■□□□□ 0.58
SIX5Q8N196 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC18.68■□□□□ 0.58
SIX5Q8N196 FIS1-203ENST00000442303 631 ntTSL 3 BASIC18.68■□□□□ 0.58
SIX5Q8N196 KRT18P3-201ENST00000451602 1288 ntBASIC18.68■□□□□ 0.58
SIX5Q8N196 AC004967.1-201ENST00000453589 447 ntBASIC18.68■□□□□ 0.58
SIX5Q8N196 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SIX5Q8N196 AC112482.1-201ENST00000492080 688 ntBASIC18.68■□□□□ 0.58
SIX5Q8N196 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.68■□□□□ 0.58
SIX5Q8N196 AC034105.1-201ENST00000563488 319 ntBASIC18.68■□□□□ 0.58
SIX5Q8N196 AC021087.4-201ENST00000563761 564 ntBASIC18.68■□□□□ 0.58
SIX5Q8N196 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.68■□□□□ 0.58
SIX5Q8N196 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
SIX5Q8N196 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SIX5Q8N196 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.68■□□□□ 0.58
SIX5Q8N196 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.68■□□□□ 0.58
SIX5Q8N196 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.68■□□□□ 0.58
SIX5Q8N196 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SIX5Q8N196 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SIX5Q8N196 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
SIX5Q8N196 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
SIX5Q8N196 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms