Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
XRN1Q8IZH2 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
XRN1Q8IZH2 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC25.3■■□□□ 1.64
XRN1Q8IZH2 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
XRN1Q8IZH2 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
XRN1Q8IZH2 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
XRN1Q8IZH2 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC25.3■■□□□ 1.64
XRN1Q8IZH2 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC25.3■■□□□ 1.64
XRN1Q8IZH2 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
XRN1Q8IZH2 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
XRN1Q8IZH2 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
XRN1Q8IZH2 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC25.29■■□□□ 1.64
XRN1Q8IZH2 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC25.29■■□□□ 1.64
XRN1Q8IZH2 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC25.29■■□□□ 1.64
XRN1Q8IZH2 ELK2BP-201ENST00000415014 1224 ntBASIC25.29■■□□□ 1.64
XRN1Q8IZH2 AC211486.1-202ENST00000416371 468 ntBASIC25.29■■□□□ 1.64
XRN1Q8IZH2 AC211476.1-201ENST00000503899 468 ntBASIC25.29■■□□□ 1.64
XRN1Q8IZH2 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC25.29■■□□□ 1.64
XRN1Q8IZH2 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC25.29■■□□□ 1.64
XRN1Q8IZH2 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC25.29■■□□□ 1.64
XRN1Q8IZH2 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC25.29■■□□□ 1.64
XRN1Q8IZH2 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
XRN1Q8IZH2 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
XRN1Q8IZH2 LINC00602-201ENST00000629776 2065 ntBASIC25.29■■□□□ 1.64
XRN1Q8IZH2 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
XRN1Q8IZH2 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
XRN1Q8IZH2 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
XRN1Q8IZH2 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
XRN1Q8IZH2 MYLKP1-201ENST00000509077 1580 ntBASIC25.29■■□□□ 1.64
XRN1Q8IZH2 MSRA-206ENST00000521209 814 ntTSL 3 BASIC25.29■■□□□ 1.64
XRN1Q8IZH2 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC25.29■■□□□ 1.64
XRN1Q8IZH2 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC25.29■■□□□ 1.64
XRN1Q8IZH2 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC25.29■■□□□ 1.64
XRN1Q8IZH2 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC25.28■■□□□ 1.64
XRN1Q8IZH2 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
XRN1Q8IZH2 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
XRN1Q8IZH2 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
XRN1Q8IZH2 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC25.28■■□□□ 1.64
XRN1Q8IZH2 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
XRN1Q8IZH2 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
XRN1Q8IZH2 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
XRN1Q8IZH2 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
XRN1Q8IZH2 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
XRN1Q8IZH2 BX005266.1-201ENST00000473402 457 ntBASIC25.28■■□□□ 1.64
XRN1Q8IZH2 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC25.28■■□□□ 1.64
XRN1Q8IZH2 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
XRN1Q8IZH2 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
XRN1Q8IZH2 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC25.28■■□□□ 1.64
XRN1Q8IZH2 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
XRN1Q8IZH2 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
XRN1Q8IZH2 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
XRN1Q8IZH2 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
XRN1Q8IZH2 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
XRN1Q8IZH2 PMPCAP1-201ENST00000508114 1576 ntBASIC25.27■■□□□ 1.64
XRN1Q8IZH2 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
XRN1Q8IZH2 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC25.27■■□□□ 1.64
XRN1Q8IZH2 AC099343.3-201ENST00000605834 2503 ntBASIC25.27■■□□□ 1.64
XRN1Q8IZH2 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
XRN1Q8IZH2 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC25.27■■□□□ 1.64
XRN1Q8IZH2 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
XRN1Q8IZH2 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC25.27■■□□□ 1.64
XRN1Q8IZH2 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
XRN1Q8IZH2 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
XRN1Q8IZH2 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC25.27■■□□□ 1.64
XRN1Q8IZH2 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
XRN1Q8IZH2 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC25.27■■□□□ 1.64
XRN1Q8IZH2 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
XRN1Q8IZH2 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
XRN1Q8IZH2 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC25.27■■□□□ 1.64
XRN1Q8IZH2 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC25.27■■□□□ 1.64
XRN1Q8IZH2 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
XRN1Q8IZH2 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC25.27■■□□□ 1.64
XRN1Q8IZH2 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC25.26■■□□□ 1.63
XRN1Q8IZH2 AC006557.2-201ENST00000592985 1240 ntBASIC25.26■■□□□ 1.63
XRN1Q8IZH2 MTDHP5-201ENST00000598980 586 ntBASIC25.26■■□□□ 1.63
XRN1Q8IZH2 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC25.26■■□□□ 1.63
XRN1Q8IZH2 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
XRN1Q8IZH2 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC25.26■■□□□ 1.63
XRN1Q8IZH2 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
XRN1Q8IZH2 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
XRN1Q8IZH2 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
XRN1Q8IZH2 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC25.26■■□□□ 1.63
XRN1Q8IZH2 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC25.26■■□□□ 1.63
XRN1Q8IZH2 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC25.26■■□□□ 1.63
XRN1Q8IZH2 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC25.26■■□□□ 1.63
XRN1Q8IZH2 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC25.26■■□□□ 1.63
XRN1Q8IZH2 RPS15-207ENST00000591032 550 ntTSL 3 BASIC25.26■■□□□ 1.63
XRN1Q8IZH2 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
XRN1Q8IZH2 AC079781.4-201ENST00000641908 219 ntBASIC25.26■■□□□ 1.63
XRN1Q8IZH2 AL158211.5-201ENST00000623583 2518 ntBASIC25.25■■□□□ 1.63
XRN1Q8IZH2 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
XRN1Q8IZH2 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
XRN1Q8IZH2 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
XRN1Q8IZH2 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
XRN1Q8IZH2 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC25.25■■□□□ 1.63
XRN1Q8IZH2 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
XRN1Q8IZH2 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC25.25■■□□□ 1.63
XRN1Q8IZH2 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC25.25■■□□□ 1.63
XRN1Q8IZH2 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
XRN1Q8IZH2 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms