Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 GMCL1P1-201ENST00000463439 1581 ntBASIC17.28■□□□□ 0.36
CCDC116Q8IYX3 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CCDC116Q8IYX3 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC116Q8IYX3 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.28■□□□□ 0.36
CCDC116Q8IYX3 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.28■□□□□ 0.36
CCDC116Q8IYX3 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC116Q8IYX3 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC116Q8IYX3 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CCDC116Q8IYX3 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC116Q8IYX3 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC116Q8IYX3 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC116Q8IYX3 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC116Q8IYX3 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC116Q8IYX3 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC116Q8IYX3 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC116Q8IYX3 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC116Q8IYX3 MIR149-201ENST00000384879 89 ntBASIC17.28■□□□□ 0.36
CCDC116Q8IYX3 LIN28AP1-201ENST00000429574 405 ntBASIC17.28■□□□□ 0.36
CCDC116Q8IYX3 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.28■□□□□ 0.36
CCDC116Q8IYX3 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.28■□□□□ 0.36
CCDC116Q8IYX3 NEK4P2-201ENST00000580004 1012 ntBASIC17.28■□□□□ 0.36
CCDC116Q8IYX3 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
CCDC116Q8IYX3 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CCDC116Q8IYX3 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC116Q8IYX3 AC141257.4-201ENST00000634557 245 ntBASIC17.28■□□□□ 0.36
CCDC116Q8IYX3 AC136944.6-201ENST00000634818 245 ntBASIC17.28■□□□□ 0.36
CCDC116Q8IYX3 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC116Q8IYX3 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.28■□□□□ 0.36
CCDC116Q8IYX3 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC116Q8IYX3 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CCDC116Q8IYX3 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC116Q8IYX3 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC116Q8IYX3 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC116Q8IYX3 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
CCDC116Q8IYX3 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.28■□□□□ 0.36
CCDC116Q8IYX3 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC116Q8IYX3 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC116Q8IYX3 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.28■□□□□ 0.36
CCDC116Q8IYX3 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CCDC116Q8IYX3 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CCDC116Q8IYX3 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC116Q8IYX3 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.28■□□□□ 0.36
CCDC116Q8IYX3 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC116Q8IYX3 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.27■□□□□ 0.36
CCDC116Q8IYX3 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
CCDC116Q8IYX3 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
CCDC116Q8IYX3 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC116Q8IYX3 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC116Q8IYX3 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.27■□□□□ 0.36
CCDC116Q8IYX3 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC116Q8IYX3 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.36
CCDC116Q8IYX3 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC116Q8IYX3 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC116Q8IYX3 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC116Q8IYX3 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC116Q8IYX3 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC116Q8IYX3 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC116Q8IYX3 AC211429.1-201ENST00000415277 523 ntBASIC17.27■□□□□ 0.36
CCDC116Q8IYX3 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.27■□□□□ 0.36
CCDC116Q8IYX3 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC116Q8IYX3 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC116Q8IYX3 SEC1P-202ENST00000473944 940 ntBASIC17.27■□□□□ 0.36
CCDC116Q8IYX3 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
CCDC116Q8IYX3 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.27■□□□□ 0.36
CCDC116Q8IYX3 AC010203.1-204ENST00000548782 407 ntBASIC17.27■□□□□ 0.36
CCDC116Q8IYX3 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.27■□□□□ 0.36
CCDC116Q8IYX3 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.27■□□□□ 0.36
CCDC116Q8IYX3 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.27■□□□□ 0.36
CCDC116Q8IYX3 AC010240.3-201ENST00000607688 395 ntBASIC17.27■□□□□ 0.36
CCDC116Q8IYX3 AC012306.2-201ENST00000609350 630 ntBASIC17.27■□□□□ 0.36
CCDC116Q8IYX3 AL138966.2-201ENST00000621997 464 ntBASIC17.27■□□□□ 0.36
CCDC116Q8IYX3 AC097493.4-201ENST00000641197 219 ntBASIC17.27■□□□□ 0.36
CCDC116Q8IYX3 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC116Q8IYX3 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC116Q8IYX3 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC116Q8IYX3 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC116Q8IYX3 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC116Q8IYX3 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
CCDC116Q8IYX3 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.27■□□□□ 0.35
CCDC116Q8IYX3 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC116Q8IYX3 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.27■□□□□ 0.35
CCDC116Q8IYX3 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC116Q8IYX3 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CCDC116Q8IYX3 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC116Q8IYX3 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.26■□□□□ 0.35
CCDC116Q8IYX3 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC116Q8IYX3 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.26■□□□□ 0.35
CCDC116Q8IYX3 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC116Q8IYX3 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC116Q8IYX3 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.26■□□□□ 0.35
CCDC116Q8IYX3 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC116Q8IYX3 ATP5G1P1-201ENST00000448724 379 ntBASIC17.26■□□□□ 0.35
CCDC116Q8IYX3 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.26■□□□□ 0.35
CCDC116Q8IYX3 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.26■□□□□ 0.35
CCDC116Q8IYX3 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.26■□□□□ 0.35
CCDC116Q8IYX3 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.26■□□□□ 0.35
CCDC116Q8IYX3 AC005363.2-201ENST00000618631 242 ntBASIC17.26■□□□□ 0.35
CCDC116Q8IYX3 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.26■□□□□ 0.35
CCDC116Q8IYX3 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CCDC116Q8IYX3 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms