Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.84■□□□□ 0.61
CDKL3Q8IVW4 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDKL3Q8IVW4 FLJ13224-201ENST00000313737 1514 ntBASIC18.84■□□□□ 0.61
CDKL3Q8IVW4 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CDKL3Q8IVW4 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CDKL3Q8IVW4 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.84■□□□□ 0.61
CDKL3Q8IVW4 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.84■□□□□ 0.61
CDKL3Q8IVW4 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.61
CDKL3Q8IVW4 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.83■□□□□ 0.61
CDKL3Q8IVW4 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
CDKL3Q8IVW4 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.83■□□□□ 0.61
CDKL3Q8IVW4 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CDKL3Q8IVW4 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CDKL3Q8IVW4 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.61
CDKL3Q8IVW4 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CDKL3Q8IVW4 AC068880.1-201ENST00000507289 2297 ntBASIC18.83■□□□□ 0.61
CDKL3Q8IVW4 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CDKL3Q8IVW4 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CDKL3Q8IVW4 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.83■□□□□ 0.6
CDKL3Q8IVW4 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.83■□□□□ 0.6
CDKL3Q8IVW4 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDKL3Q8IVW4 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDKL3Q8IVW4 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.83■□□□□ 0.6
CDKL3Q8IVW4 TSPY15P-201ENST00000457163 923 ntBASIC18.83■□□□□ 0.6
CDKL3Q8IVW4 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.83■□□□□ 0.6
CDKL3Q8IVW4 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.83■□□□□ 0.6
CDKL3Q8IVW4 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDKL3Q8IVW4 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CDKL3Q8IVW4 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.83■□□□□ 0.6
CDKL3Q8IVW4 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.83■□□□□ 0.6
CDKL3Q8IVW4 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDKL3Q8IVW4 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CDKL3Q8IVW4 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDKL3Q8IVW4 CYP2D8P-201ENST00000433633 1490 ntBASIC18.83■□□□□ 0.6
CDKL3Q8IVW4 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.83■□□□□ 0.6
CDKL3Q8IVW4 KRT8P9-201ENST00000558927 1449 ntBASIC18.83■□□□□ 0.6
CDKL3Q8IVW4 AC099343.3-201ENST00000605834 2503 ntBASIC18.82■□□□□ 0.6
CDKL3Q8IVW4 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.82■□□□□ 0.6
CDKL3Q8IVW4 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDKL3Q8IVW4 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CDKL3Q8IVW4 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDKL3Q8IVW4 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.82■□□□□ 0.6
CDKL3Q8IVW4 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDKL3Q8IVW4 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CDKL3Q8IVW4 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDKL3Q8IVW4 MMP23A-201ENST00000234610 1017 ntBASIC18.82■□□□□ 0.6
CDKL3Q8IVW4 INGX-201ENST00000359239 846 ntBASIC18.82■□□□□ 0.6
CDKL3Q8IVW4 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDKL3Q8IVW4 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDKL3Q8IVW4 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CDKL3Q8IVW4 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDKL3Q8IVW4 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDKL3Q8IVW4 SLC25A6P5-201ENST00000435663 894 ntBASIC18.82■□□□□ 0.6
CDKL3Q8IVW4 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDKL3Q8IVW4 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDKL3Q8IVW4 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDKL3Q8IVW4 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDKL3Q8IVW4 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.82■□□□□ 0.6
CDKL3Q8IVW4 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.82■□□□□ 0.6
CDKL3Q8IVW4 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CDKL3Q8IVW4 AC010947.1-201ENST00000623454 693 ntBASIC18.82■□□□□ 0.6
CDKL3Q8IVW4 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.82■□□□□ 0.6
CDKL3Q8IVW4 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CDKL3Q8IVW4 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDKL3Q8IVW4 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CDKL3Q8IVW4 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDKL3Q8IVW4 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CDKL3Q8IVW4 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDKL3Q8IVW4 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.82■□□□□ 0.6
CDKL3Q8IVW4 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDKL3Q8IVW4 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CDKL3Q8IVW4 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CDKL3Q8IVW4 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDKL3Q8IVW4 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDKL3Q8IVW4 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.81■□□□□ 0.6
CDKL3Q8IVW4 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CDKL3Q8IVW4 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.81■□□□□ 0.6
CDKL3Q8IVW4 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDKL3Q8IVW4 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CDKL3Q8IVW4 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.81■□□□□ 0.6
CDKL3Q8IVW4 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.81■□□□□ 0.6
CDKL3Q8IVW4 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.81■□□□□ 0.6
CDKL3Q8IVW4 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CDKL3Q8IVW4 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.81■□□□□ 0.6
CDKL3Q8IVW4 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CDKL3Q8IVW4 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDKL3Q8IVW4 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.81■□□□□ 0.6
CDKL3Q8IVW4 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDKL3Q8IVW4 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDKL3Q8IVW4 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CDKL3Q8IVW4 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.81■□□□□ 0.6
CDKL3Q8IVW4 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.8■□□□□ 0.6
CDKL3Q8IVW4 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.8■□□□□ 0.6
CDKL3Q8IVW4 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.8■□□□□ 0.6
CDKL3Q8IVW4 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDKL3Q8IVW4 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CDKL3Q8IVW4 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.8■□□□□ 0.6
CDKL3Q8IVW4 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CDKL3Q8IVW4 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDKL3Q8IVW4 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms