Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LINC00346Q8IVM7 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
LINC00346Q8IVM7 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
LINC00346Q8IVM7 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LINC00346Q8IVM7 PCDHB18P-201ENST00000524813 2368 ntBASIC16.23■□□□□ 0.19
LINC00346Q8IVM7 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
LINC00346Q8IVM7 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.23■□□□□ 0.19
LINC00346Q8IVM7 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LINC00346Q8IVM7 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
LINC00346Q8IVM7 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LINC00346Q8IVM7 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.23■□□□□ 0.19
LINC00346Q8IVM7 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LINC00346Q8IVM7 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
LINC00346Q8IVM7 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
LINC00346Q8IVM7 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
LINC00346Q8IVM7 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
LINC00346Q8IVM7 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
LINC00346Q8IVM7 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.23■□□□□ 0.19
LINC00346Q8IVM7 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC16.23■□□□□ 0.19
LINC00346Q8IVM7 KRT18P23-201ENST00000435622 1283 ntBASIC16.23■□□□□ 0.19
LINC00346Q8IVM7 CCR12P-201ENST00000446203 998 ntBASIC16.23■□□□□ 0.19
LINC00346Q8IVM7 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LINC00346Q8IVM7 TSPY15P-201ENST00000457163 923 ntBASIC16.23■□□□□ 0.19
LINC00346Q8IVM7 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC16.23■□□□□ 0.19
LINC00346Q8IVM7 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16.23■□□□□ 0.19
LINC00346Q8IVM7 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
LINC00346Q8IVM7 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LINC00346Q8IVM7 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.23■□□□□ 0.19
LINC00346Q8IVM7 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
LINC00346Q8IVM7 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LINC00346Q8IVM7 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LINC00346Q8IVM7 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LINC00346Q8IVM7 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.22■□□□□ 0.19
LINC00346Q8IVM7 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
LINC00346Q8IVM7 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
LINC00346Q8IVM7 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LINC00346Q8IVM7 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
LINC00346Q8IVM7 KRT17P2-201ENST00000300992 1314 ntBASIC16.22■□□□□ 0.19
LINC00346Q8IVM7 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.22■□□□□ 0.19
LINC00346Q8IVM7 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LINC00346Q8IVM7 AC092338.2-201ENST00000568827 1415 ntBASIC16.22■□□□□ 0.19
LINC00346Q8IVM7 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LINC00346Q8IVM7 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
LINC00346Q8IVM7 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LINC00346Q8IVM7 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LINC00346Q8IVM7 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.22■□□□□ 0.19
LINC00346Q8IVM7 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.22■□□□□ 0.19
LINC00346Q8IVM7 C2orf69P3-201ENST00000565542 1120 ntBASIC16.22■□□□□ 0.19
LINC00346Q8IVM7 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.22■□□□□ 0.19
LINC00346Q8IVM7 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LINC00346Q8IVM7 SNX21-213ENST00000614929 587 ntTSL 5 BASIC16.22■□□□□ 0.19
LINC00346Q8IVM7 AC116562.4-202ENST00000641738 218 ntBASIC16.22■□□□□ 0.19
LINC00346Q8IVM7 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LINC00346Q8IVM7 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.22■□□□□ 0.19
LINC00346Q8IVM7 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
LINC00346Q8IVM7 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LINC00346Q8IVM7 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
LINC00346Q8IVM7 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.22■□□□□ 0.19
LINC00346Q8IVM7 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
LINC00346Q8IVM7 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.22■□□□□ 0.19
LINC00346Q8IVM7 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
LINC00346Q8IVM7 GMCL1P1-201ENST00000463439 1581 ntBASIC16.21■□□□□ 0.19
LINC00346Q8IVM7 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
LINC00346Q8IVM7 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LINC00346Q8IVM7 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
LINC00346Q8IVM7 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.21■□□□□ 0.19
LINC00346Q8IVM7 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LINC00346Q8IVM7 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.21■□□□□ 0.19
LINC00346Q8IVM7 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.21■□□□□ 0.19
LINC00346Q8IVM7 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
LINC00346Q8IVM7 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.21■□□□□ 0.19
LINC00346Q8IVM7 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.21■□□□□ 0.19
LINC00346Q8IVM7 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.21■□□□□ 0.19
LINC00346Q8IVM7 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LINC00346Q8IVM7 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.21■□□□□ 0.19
LINC00346Q8IVM7 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LINC00346Q8IVM7 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
LINC00346Q8IVM7 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LINC00346Q8IVM7 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LINC00346Q8IVM7 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
LINC00346Q8IVM7 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
LINC00346Q8IVM7 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LINC00346Q8IVM7 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
LINC00346Q8IVM7 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LINC00346Q8IVM7 AC007663.1-201ENST00000438948 1240 ntBASIC16.21■□□□□ 0.19
LINC00346Q8IVM7 BX088651.1-201ENST00000540551 451 ntBASIC16.21■□□□□ 0.19
LINC00346Q8IVM7 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC16.21■□□□□ 0.19
LINC00346Q8IVM7 MIR4497-201ENST00000583208 89 ntBASIC16.21■□□□□ 0.19
LINC00346Q8IVM7 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LINC00346Q8IVM7 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LINC00346Q8IVM7 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LINC00346Q8IVM7 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LINC00346Q8IVM7 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LINC00346Q8IVM7 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
LINC00346Q8IVM7 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LINC00346Q8IVM7 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
LINC00346Q8IVM7 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.21■□□□□ 0.18
LINC00346Q8IVM7 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
LINC00346Q8IVM7 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
LINC00346Q8IVM7 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms