Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SHC4Q6S5L8 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SHC4Q6S5L8 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC20.67■□□□□ 0.9
SHC4Q6S5L8 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.67■□□□□ 0.9
SHC4Q6S5L8 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
SHC4Q6S5L8 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.67■□□□□ 0.9
SHC4Q6S5L8 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SHC4Q6S5L8 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SHC4Q6S5L8 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SHC4Q6S5L8 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SHC4Q6S5L8 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
SHC4Q6S5L8 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SHC4Q6S5L8 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC20.67■□□□□ 0.9
SHC4Q6S5L8 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
SHC4Q6S5L8 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SHC4Q6S5L8 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC20.66■□□□□ 0.9
SHC4Q6S5L8 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
SHC4Q6S5L8 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SHC4Q6S5L8 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SHC4Q6S5L8 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
SHC4Q6S5L8 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
SHC4Q6S5L8 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SHC4Q6S5L8 SEC1P-202ENST00000473944 940 ntBASIC20.66■□□□□ 0.9
SHC4Q6S5L8 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SHC4Q6S5L8 MIR3180-4-201ENST00000582223 153 ntBASIC20.66■□□□□ 0.9
SHC4Q6S5L8 AC010240.3-201ENST00000607688 395 ntBASIC20.66■□□□□ 0.9
SHC4Q6S5L8 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
SHC4Q6S5L8 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SHC4Q6S5L8 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
SHC4Q6S5L8 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC20.66■□□□□ 0.9
SHC4Q6S5L8 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SHC4Q6S5L8 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SHC4Q6S5L8 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC20.66■□□□□ 0.9
SHC4Q6S5L8 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SHC4Q6S5L8 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SHC4Q6S5L8 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SHC4Q6S5L8 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SHC4Q6S5L8 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SHC4Q6S5L8 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SHC4Q6S5L8 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
SHC4Q6S5L8 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
SHC4Q6S5L8 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC20.65■□□□□ 0.9
SHC4Q6S5L8 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SHC4Q6S5L8 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC20.65■□□□□ 0.9
SHC4Q6S5L8 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SHC4Q6S5L8 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SHC4Q6S5L8 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
SHC4Q6S5L8 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SHC4Q6S5L8 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SHC4Q6S5L8 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SHC4Q6S5L8 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SHC4Q6S5L8 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SHC4Q6S5L8 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SHC4Q6S5L8 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC20.65■□□□□ 0.9
SHC4Q6S5L8 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SHC4Q6S5L8 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SHC4Q6S5L8 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
SHC4Q6S5L8 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.65■□□□□ 0.9
SHC4Q6S5L8 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.65■□□□□ 0.9
SHC4Q6S5L8 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.65■□□□□ 0.9
SHC4Q6S5L8 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.65■□□□□ 0.9
SHC4Q6S5L8 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SHC4Q6S5L8 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SHC4Q6S5L8 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SHC4Q6S5L8 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC20.65■□□□□ 0.9
SHC4Q6S5L8 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
SHC4Q6S5L8 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SHC4Q6S5L8 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.9
SHC4Q6S5L8 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC20.64■□□□□ 0.9
SHC4Q6S5L8 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
SHC4Q6S5L8 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC20.64■□□□□ 0.9
SHC4Q6S5L8 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC20.64■□□□□ 0.9
SHC4Q6S5L8 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SHC4Q6S5L8 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SHC4Q6S5L8 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
SHC4Q6S5L8 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SHC4Q6S5L8 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SHC4Q6S5L8 AC012317.2-201ENST00000623305 2251 ntBASIC20.64■□□□□ 0.89
SHC4Q6S5L8 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SHC4Q6S5L8 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SHC4Q6S5L8 MMP23A-201ENST00000234610 1017 ntBASIC20.64■□□□□ 0.89
SHC4Q6S5L8 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SHC4Q6S5L8 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
SHC4Q6S5L8 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SHC4Q6S5L8 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SHC4Q6S5L8 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC20.64■□□□□ 0.89
SHC4Q6S5L8 AC009947.2-201ENST00000444014 672 ntBASIC20.64■□□□□ 0.89
SHC4Q6S5L8 ECEL1P2-202ENST00000465689 757 ntBASIC20.64■□□□□ 0.89
SHC4Q6S5L8 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.64■□□□□ 0.89
SHC4Q6S5L8 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC20.64■□□□□ 0.89
SHC4Q6S5L8 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SHC4Q6S5L8 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SHC4Q6S5L8 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SHC4Q6S5L8 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SHC4Q6S5L8 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
SHC4Q6S5L8 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SHC4Q6S5L8 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC20.64■□□□□ 0.89
SHC4Q6S5L8 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SHC4Q6S5L8 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SHC4Q6S5L8 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms