Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
FOXR1Q6PIV2 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.11■□□□□ 0.65
FOXR1Q6PIV2 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
FOXR1Q6PIV2 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
FOXR1Q6PIV2 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.11■□□□□ 0.65
FOXR1Q6PIV2 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.11■□□□□ 0.65
FOXR1Q6PIV2 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.11■□□□□ 0.65
FOXR1Q6PIV2 AC005363.2-201ENST00000618631 242 ntBASIC19.11■□□□□ 0.65
FOXR1Q6PIV2 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
FOXR1Q6PIV2 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
FOXR1Q6PIV2 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
FOXR1Q6PIV2 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
FOXR1Q6PIV2 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
FOXR1Q6PIV2 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
FOXR1Q6PIV2 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
FOXR1Q6PIV2 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.11■□□□□ 0.65
FOXR1Q6PIV2 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
FOXR1Q6PIV2 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
FOXR1Q6PIV2 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.11■□□□□ 0.65
FOXR1Q6PIV2 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
FOXR1Q6PIV2 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
FOXR1Q6PIV2 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
FOXR1Q6PIV2 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
FOXR1Q6PIV2 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
FOXR1Q6PIV2 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
FOXR1Q6PIV2 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
FOXR1Q6PIV2 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
FOXR1Q6PIV2 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
FOXR1Q6PIV2 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
FOXR1Q6PIV2 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
FOXR1Q6PIV2 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
FOXR1Q6PIV2 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
FOXR1Q6PIV2 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
FOXR1Q6PIV2 RBM17P1-201ENST00000453646 1190 ntBASIC19.1■□□□□ 0.65
FOXR1Q6PIV2 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
FOXR1Q6PIV2 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
FOXR1Q6PIV2 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.1■□□□□ 0.65
FOXR1Q6PIV2 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.1■□□□□ 0.65
FOXR1Q6PIV2 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
FOXR1Q6PIV2 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.1■□□□□ 0.65
FOXR1Q6PIV2 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
FOXR1Q6PIV2 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
FOXR1Q6PIV2 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
FOXR1Q6PIV2 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC19.1■□□□□ 0.65
FOXR1Q6PIV2 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
FOXR1Q6PIV2 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
FOXR1Q6PIV2 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.1■□□□□ 0.65
FOXR1Q6PIV2 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
FOXR1Q6PIV2 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.1■□□□□ 0.65
FOXR1Q6PIV2 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
FOXR1Q6PIV2 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
FOXR1Q6PIV2 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
FOXR1Q6PIV2 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
FOXR1Q6PIV2 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
FOXR1Q6PIV2 AL596257.1-201ENST00000641463 2694 ntBASIC19.09■□□□□ 0.65
FOXR1Q6PIV2 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
FOXR1Q6PIV2 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19.09■□□□□ 0.65
FOXR1Q6PIV2 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC19.09■□□□□ 0.65
FOXR1Q6PIV2 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
FOXR1Q6PIV2 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
FOXR1Q6PIV2 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.09■□□□□ 0.65
FOXR1Q6PIV2 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
FOXR1Q6PIV2 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
FOXR1Q6PIV2 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
FOXR1Q6PIV2 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.09■□□□□ 0.65
FOXR1Q6PIV2 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.09■□□□□ 0.65
FOXR1Q6PIV2 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.09■□□□□ 0.65
FOXR1Q6PIV2 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.09■□□□□ 0.65
FOXR1Q6PIV2 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.09■□□□□ 0.65
FOXR1Q6PIV2 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.09■□□□□ 0.65
FOXR1Q6PIV2 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.09■□□□□ 0.65
FOXR1Q6PIV2 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
FOXR1Q6PIV2 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
FOXR1Q6PIV2 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.09■□□□□ 0.65
FOXR1Q6PIV2 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
FOXR1Q6PIV2 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
FOXR1Q6PIV2 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
FOXR1Q6PIV2 BANP-227ENST00000626016 2144 ntTSL 2 BASIC19.09■□□□□ 0.65
FOXR1Q6PIV2 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
FOXR1Q6PIV2 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
FOXR1Q6PIV2 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
FOXR1Q6PIV2 KRT8P9-201ENST00000558927 1449 ntBASIC19.08■□□□□ 0.65
FOXR1Q6PIV2 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
FOXR1Q6PIV2 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.65
FOXR1Q6PIV2 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.65
FOXR1Q6PIV2 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
FOXR1Q6PIV2 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
FOXR1Q6PIV2 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.08■□□□□ 0.65
FOXR1Q6PIV2 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
FOXR1Q6PIV2 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC19.08■□□□□ 0.65
FOXR1Q6PIV2 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
FOXR1Q6PIV2 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
FOXR1Q6PIV2 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
FOXR1Q6PIV2 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
FOXR1Q6PIV2 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.08■□□□□ 0.65
FOXR1Q6PIV2 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC19.08■□□□□ 0.65
FOXR1Q6PIV2 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
FOXR1Q6PIV2 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.08■□□□□ 0.64
FOXR1Q6PIV2 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
FOXR1Q6PIV2 KRT18P57-201ENST00000443599 1254 ntBASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms