Protein–RNA interactions for Protein: Q6PCB7

SLC27A1, Long-chain fatty acid transport protein 1, humanhuman

Predictions only

Length 646 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC27A1Q6PCB7 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC27A1Q6PCB7 LINC00602-201ENST00000629776 2065 ntBASIC19.76■□□□□ 0.75
SLC27A1Q6PCB7 BX323043.1-201ENST00000641006 1765 ntBASIC19.76■□□□□ 0.75
SLC27A1Q6PCB7 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
SLC27A1Q6PCB7 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC27A1Q6PCB7 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
SLC27A1Q6PCB7 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC27A1Q6PCB7 TSPY19P-201ENST00000418461 509 ntBASIC19.76■□□□□ 0.75
SLC27A1Q6PCB7 TSPY18P-201ENST00000441642 509 ntBASIC19.76■□□□□ 0.75
SLC27A1Q6PCB7 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC27A1Q6PCB7 AC111152.3-201ENST00000569699 673 ntBASIC19.76■□□□□ 0.75
SLC27A1Q6PCB7 TBCB-205ENST00000585746 875 ntTSL 3 BASIC19.76■□□□□ 0.75
SLC27A1Q6PCB7 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC19.76■□□□□ 0.75
SLC27A1Q6PCB7 AL121772.3-201ENST00000610840 674 ntBASIC19.76■□□□□ 0.75
SLC27A1Q6PCB7 AC009154.2-201ENST00000621177 724 ntBASIC19.76■□□□□ 0.75
SLC27A1Q6PCB7 AC018445.3-201ENST00000624177 1945 ntBASIC19.76■□□□□ 0.75
SLC27A1Q6PCB7 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC27A1Q6PCB7 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC27A1Q6PCB7 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC27A1Q6PCB7 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SLC27A1Q6PCB7 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.76■□□□□ 0.75
SLC27A1Q6PCB7 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SLC27A1Q6PCB7 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC27A1Q6PCB7 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SLC27A1Q6PCB7 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC27A1Q6PCB7 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC27A1Q6PCB7 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.75■□□□□ 0.75
SLC27A1Q6PCB7 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.75■□□□□ 0.75
SLC27A1Q6PCB7 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.75■□□□□ 0.75
SLC27A1Q6PCB7 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SLC27A1Q6PCB7 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.75■□□□□ 0.75
SLC27A1Q6PCB7 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC27A1Q6PCB7 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC27A1Q6PCB7 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC27A1Q6PCB7 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
SLC27A1Q6PCB7 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.75■□□□□ 0.75
SLC27A1Q6PCB7 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
SLC27A1Q6PCB7 AC091607.1-201ENST00000490318 1060 ntBASIC19.75■□□□□ 0.75
SLC27A1Q6PCB7 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC19.75■□□□□ 0.75
SLC27A1Q6PCB7 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.75■□□□□ 0.75
SLC27A1Q6PCB7 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
SLC27A1Q6PCB7 AC099336.1-202ENST00000602961 463 ntBASIC19.75■□□□□ 0.75
SLC27A1Q6PCB7 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC19.75■□□□□ 0.75
SLC27A1Q6PCB7 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.75■□□□□ 0.75
SLC27A1Q6PCB7 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.75■□□□□ 0.75
SLC27A1Q6PCB7 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SLC27A1Q6PCB7 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
SLC27A1Q6PCB7 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
SLC27A1Q6PCB7 NSUN5P1-202ENST00000421140 1535 ntBASIC19.75■□□□□ 0.75
SLC27A1Q6PCB7 NSUN5P2-203ENST00000457352 1529 ntBASIC19.75■□□□□ 0.75
SLC27A1Q6PCB7 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.75■□□□□ 0.75
SLC27A1Q6PCB7 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC27A1Q6PCB7 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC27A1Q6PCB7 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
SLC27A1Q6PCB7 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
SLC27A1Q6PCB7 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC27A1Q6PCB7 AC073592.3-201ENST00000625118 1834 ntBASIC19.74■□□□□ 0.75
SLC27A1Q6PCB7 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SLC27A1Q6PCB7 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC27A1Q6PCB7 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
SLC27A1Q6PCB7 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SLC27A1Q6PCB7 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC27A1Q6PCB7 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
SLC27A1Q6PCB7 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC27A1Q6PCB7 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC27A1Q6PCB7 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC27A1Q6PCB7 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC19.74■□□□□ 0.75
SLC27A1Q6PCB7 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SLC27A1Q6PCB7 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SLC27A1Q6PCB7 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC19.74■□□□□ 0.75
SLC27A1Q6PCB7 AL732292.2-201ENST00000609649 430 ntBASIC19.74■□□□□ 0.75
SLC27A1Q6PCB7 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
SLC27A1Q6PCB7 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SLC27A1Q6PCB7 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC27A1Q6PCB7 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SLC27A1Q6PCB7 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC27A1Q6PCB7 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
SLC27A1Q6PCB7 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC27A1Q6PCB7 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC27A1Q6PCB7 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC27A1Q6PCB7 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC27A1Q6PCB7 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SLC27A1Q6PCB7 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC27A1Q6PCB7 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC27A1Q6PCB7 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC27A1Q6PCB7 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SLC27A1Q6PCB7 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC27A1Q6PCB7 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SLC27A1Q6PCB7 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC27A1Q6PCB7 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
SLC27A1Q6PCB7 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SLC27A1Q6PCB7 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC19.73■□□□□ 0.75
SLC27A1Q6PCB7 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SLC27A1Q6PCB7 AC068472.1-201ENST00000474589 881 ntBASIC19.73■□□□□ 0.75
SLC27A1Q6PCB7 KRT18P31-201ENST00000506277 1292 ntBASIC19.73■□□□□ 0.75
SLC27A1Q6PCB7 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.73■□□□□ 0.75
SLC27A1Q6PCB7 UNC93B7-201ENST00000509439 705 ntBASIC19.73■□□□□ 0.75
SLC27A1Q6PCB7 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.73■□□□□ 0.75
SLC27A1Q6PCB7 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.73■□□□□ 0.75
SLC27A1Q6PCB7 AC091304.2-201ENST00000564639 760 ntBASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms