Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
H3F3CQ6NXT2 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
H3F3CQ6NXT2 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
H3F3CQ6NXT2 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
H3F3CQ6NXT2 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.92■□□□□ 0.3
H3F3CQ6NXT2 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.92■□□□□ 0.3
H3F3CQ6NXT2 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
H3F3CQ6NXT2 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
H3F3CQ6NXT2 NUS1P1-201ENST00000446295 882 ntBASIC16.92■□□□□ 0.3
H3F3CQ6NXT2 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.92■□□□□ 0.3
H3F3CQ6NXT2 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.92■□□□□ 0.3
H3F3CQ6NXT2 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.92■□□□□ 0.3
H3F3CQ6NXT2 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
H3F3CQ6NXT2 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.92■□□□□ 0.3
H3F3CQ6NXT2 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
H3F3CQ6NXT2 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
H3F3CQ6NXT2 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
H3F3CQ6NXT2 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
H3F3CQ6NXT2 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
H3F3CQ6NXT2 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
H3F3CQ6NXT2 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
H3F3CQ6NXT2 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
H3F3CQ6NXT2 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
H3F3CQ6NXT2 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
H3F3CQ6NXT2 AC009102.3-201ENST00000623118 1491 ntBASIC16.92■□□□□ 0.3
H3F3CQ6NXT2 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
H3F3CQ6NXT2 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
H3F3CQ6NXT2 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.91■□□□□ 0.3
H3F3CQ6NXT2 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
H3F3CQ6NXT2 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.91■□□□□ 0.3
H3F3CQ6NXT2 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
H3F3CQ6NXT2 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
H3F3CQ6NXT2 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.91■□□□□ 0.3
H3F3CQ6NXT2 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
H3F3CQ6NXT2 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
H3F3CQ6NXT2 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
H3F3CQ6NXT2 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
H3F3CQ6NXT2 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
H3F3CQ6NXT2 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC16.91■□□□□ 0.3
H3F3CQ6NXT2 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
H3F3CQ6NXT2 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
H3F3CQ6NXT2 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
H3F3CQ6NXT2 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
H3F3CQ6NXT2 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
H3F3CQ6NXT2 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
H3F3CQ6NXT2 RN7SL606P-201ENST00000472779 293 ntBASIC16.91■□□□□ 0.3
H3F3CQ6NXT2 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
H3F3CQ6NXT2 AC113404.2-201ENST00000507884 177 ntBASIC16.91■□□□□ 0.3
H3F3CQ6NXT2 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.91■□□□□ 0.3
H3F3CQ6NXT2 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.91■□□□□ 0.3
H3F3CQ6NXT2 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.91■□□□□ 0.3
H3F3CQ6NXT2 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.91■□□□□ 0.3
H3F3CQ6NXT2 AC008687.5-201ENST00000593746 558 ntBASIC16.91■□□□□ 0.3
H3F3CQ6NXT2 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.91■□□□□ 0.3
H3F3CQ6NXT2 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.91■□□□□ 0.3
H3F3CQ6NXT2 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
H3F3CQ6NXT2 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
H3F3CQ6NXT2 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
H3F3CQ6NXT2 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
H3F3CQ6NXT2 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
H3F3CQ6NXT2 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.91■□□□□ 0.3
H3F3CQ6NXT2 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
H3F3CQ6NXT2 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC16.91■□□□□ 0.3
H3F3CQ6NXT2 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.91■□□□□ 0.3
H3F3CQ6NXT2 TNXA-203ENST00000507684 2038 ntBASIC16.91■□□□□ 0.3
H3F3CQ6NXT2 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
H3F3CQ6NXT2 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
H3F3CQ6NXT2 AL353692.3-201ENST00000407031 1396 ntBASIC16.9■□□□□ 0.3
H3F3CQ6NXT2 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
H3F3CQ6NXT2 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
H3F3CQ6NXT2 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.9■□□□□ 0.3
H3F3CQ6NXT2 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
H3F3CQ6NXT2 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
H3F3CQ6NXT2 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
H3F3CQ6NXT2 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
H3F3CQ6NXT2 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
H3F3CQ6NXT2 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
H3F3CQ6NXT2 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
H3F3CQ6NXT2 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
H3F3CQ6NXT2 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
H3F3CQ6NXT2 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
H3F3CQ6NXT2 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.9■□□□□ 0.3
H3F3CQ6NXT2 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.9■□□□□ 0.3
H3F3CQ6NXT2 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
H3F3CQ6NXT2 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.9■□□□□ 0.3
H3F3CQ6NXT2 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.9■□□□□ 0.3
H3F3CQ6NXT2 IGHV3-41-201ENST00000613121 348 ntBASIC16.9■□□□□ 0.3
H3F3CQ6NXT2 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.9■□□□□ 0.3
H3F3CQ6NXT2 AC012313.10-201ENST00000623509 926 ntBASIC16.9■□□□□ 0.3
H3F3CQ6NXT2 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
H3F3CQ6NXT2 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
H3F3CQ6NXT2 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
H3F3CQ6NXT2 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
H3F3CQ6NXT2 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.9■□□□□ 0.3
H3F3CQ6NXT2 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
H3F3CQ6NXT2 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.89■□□□□ 0.3
H3F3CQ6NXT2 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
H3F3CQ6NXT2 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
H3F3CQ6NXT2 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.89■□□□□ 0.29
H3F3CQ6NXT2 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms