Protein–RNA interactions for Protein: Q6FI13

HIST2H2AA3, Histone H2A type 2-A, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2AA3Q6FI13 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HIST2H2AA3Q6FI13 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
HIST2H2AA3Q6FI13 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
HIST2H2AA3Q6FI13 AL390961.4-201ENST00000623958 2535 ntBASIC17.72■□□□□ 0.43
HIST2H2AA3Q6FI13 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HIST2H2AA3Q6FI13 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.72■□□□□ 0.43
HIST2H2AA3Q6FI13 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HIST2H2AA3Q6FI13 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HIST2H2AA3Q6FI13 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HIST2H2AA3Q6FI13 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
HIST2H2AA3Q6FI13 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.72■□□□□ 0.43
HIST2H2AA3Q6FI13 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HIST2H2AA3Q6FI13 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
HIST2H2AA3Q6FI13 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HIST2H2AA3Q6FI13 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
HIST2H2AA3Q6FI13 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.71■□□□□ 0.43
HIST2H2AA3Q6FI13 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
HIST2H2AA3Q6FI13 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
HIST2H2AA3Q6FI13 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.71■□□□□ 0.43
HIST2H2AA3Q6FI13 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.71■□□□□ 0.43
HIST2H2AA3Q6FI13 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.71■□□□□ 0.43
HIST2H2AA3Q6FI13 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
HIST2H2AA3Q6FI13 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
HIST2H2AA3Q6FI13 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
HIST2H2AA3Q6FI13 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
HIST2H2AA3Q6FI13 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.71■□□□□ 0.43
HIST2H2AA3Q6FI13 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HIST2H2AA3Q6FI13 LIN28AP1-201ENST00000429574 405 ntBASIC17.71■□□□□ 0.43
HIST2H2AA3Q6FI13 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.71■□□□□ 0.43
HIST2H2AA3Q6FI13 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.71■□□□□ 0.43
HIST2H2AA3Q6FI13 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HIST2H2AA3Q6FI13 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.71■□□□□ 0.43
HIST2H2AA3Q6FI13 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.71■□□□□ 0.43
HIST2H2AA3Q6FI13 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.71■□□□□ 0.43
HIST2H2AA3Q6FI13 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.71■□□□□ 0.43
HIST2H2AA3Q6FI13 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.71■□□□□ 0.43
HIST2H2AA3Q6FI13 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.71■□□□□ 0.43
HIST2H2AA3Q6FI13 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HIST2H2AA3Q6FI13 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HIST2H2AA3Q6FI13 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.71■□□□□ 0.43
HIST2H2AA3Q6FI13 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.71■□□□□ 0.43
HIST2H2AA3Q6FI13 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.71■□□□□ 0.43
HIST2H2AA3Q6FI13 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HIST2H2AA3Q6FI13 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HIST2H2AA3Q6FI13 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.71■□□□□ 0.43
HIST2H2AA3Q6FI13 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
HIST2H2AA3Q6FI13 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HIST2H2AA3Q6FI13 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
HIST2H2AA3Q6FI13 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.7■□□□□ 0.42
HIST2H2AA3Q6FI13 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.7■□□□□ 0.42
HIST2H2AA3Q6FI13 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
HIST2H2AA3Q6FI13 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HIST2H2AA3Q6FI13 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.7■□□□□ 0.42
HIST2H2AA3Q6FI13 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
HIST2H2AA3Q6FI13 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
HIST2H2AA3Q6FI13 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
HIST2H2AA3Q6FI13 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.7■□□□□ 0.42
HIST2H2AA3Q6FI13 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
HIST2H2AA3Q6FI13 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.7■□□□□ 0.42
HIST2H2AA3Q6FI13 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.7■□□□□ 0.42
HIST2H2AA3Q6FI13 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.7■□□□□ 0.42
HIST2H2AA3Q6FI13 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HIST2H2AA3Q6FI13 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HIST2H2AA3Q6FI13 AC073912.3-201ENST00000624414 853 ntBASIC17.7■□□□□ 0.42
HIST2H2AA3Q6FI13 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
HIST2H2AA3Q6FI13 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.7■□□□□ 0.42
HIST2H2AA3Q6FI13 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HIST2H2AA3Q6FI13 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
HIST2H2AA3Q6FI13 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.7■□□□□ 0.42
HIST2H2AA3Q6FI13 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HIST2H2AA3Q6FI13 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
HIST2H2AA3Q6FI13 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
HIST2H2AA3Q6FI13 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HIST2H2AA3Q6FI13 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HIST2H2AA3Q6FI13 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HIST2H2AA3Q6FI13 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HIST2H2AA3Q6FI13 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HIST2H2AA3Q6FI13 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
HIST2H2AA3Q6FI13 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HIST2H2AA3Q6FI13 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
HIST2H2AA3Q6FI13 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.69■□□□□ 0.42
HIST2H2AA3Q6FI13 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HIST2H2AA3Q6FI13 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HIST2H2AA3Q6FI13 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HIST2H2AA3Q6FI13 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HIST2H2AA3Q6FI13 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HIST2H2AA3Q6FI13 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.69■□□□□ 0.42
HIST2H2AA3Q6FI13 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
HIST2H2AA3Q6FI13 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HIST2H2AA3Q6FI13 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.69■□□□□ 0.42
HIST2H2AA3Q6FI13 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.69■□□□□ 0.42
HIST2H2AA3Q6FI13 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
HIST2H2AA3Q6FI13 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.69■□□□□ 0.42
HIST2H2AA3Q6FI13 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.69■□□□□ 0.42
HIST2H2AA3Q6FI13 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.69■□□□□ 0.42
HIST2H2AA3Q6FI13 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
HIST2H2AA3Q6FI13 ATP5G1P1-201ENST00000448724 379 ntBASIC17.69■□□□□ 0.42
HIST2H2AA3Q6FI13 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.69■□□□□ 0.42
HIST2H2AA3Q6FI13 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.69■□□□□ 0.42
HIST2H2AA3Q6FI13 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms