Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC12.55□□□□□ -0.4
LINC00242Q5T6M2 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00242Q5T6M2 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00242Q5T6M2 NARF-204ENST00000390006 1766 ntTSL 2 BASIC12.55□□□□□ -0.4
LINC00242Q5T6M2 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00242Q5T6M2 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
LINC00242Q5T6M2 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
LINC00242Q5T6M2 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC12.55□□□□□ -0.4
LINC00242Q5T6M2 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC12.55□□□□□ -0.4
LINC00242Q5T6M2 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00242Q5T6M2 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00242Q5T6M2 NME9-203ENST00000383180 2133 ntTSL 2 BASIC12.55□□□□□ -0.4
LINC00242Q5T6M2 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC12.55□□□□□ -0.4
LINC00242Q5T6M2 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00242Q5T6M2 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00242Q5T6M2 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00242Q5T6M2 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00242Q5T6M2 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC12.54□□□□□ -0.4
LINC00242Q5T6M2 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
LINC00242Q5T6M2 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00242Q5T6M2 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00242Q5T6M2 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC12.54□□□□□ -0.4
LINC00242Q5T6M2 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
LINC00242Q5T6M2 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00242Q5T6M2 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
LINC00242Q5T6M2 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
LINC00242Q5T6M2 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00242Q5T6M2 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC12.54□□□□□ -0.4
LINC00242Q5T6M2 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00242Q5T6M2 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC12.54□□□□□ -0.4
LINC00242Q5T6M2 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
LINC00242Q5T6M2 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00242Q5T6M2 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00242Q5T6M2 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC12.54□□□□□ -0.4
LINC00242Q5T6M2 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC12.54□□□□□ -0.4
LINC00242Q5T6M2 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00242Q5T6M2 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC12.54□□□□□ -0.4
LINC00242Q5T6M2 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
LINC00242Q5T6M2 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00242Q5T6M2 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00242Q5T6M2 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
LINC00242Q5T6M2 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC12.54□□□□□ -0.4
LINC00242Q5T6M2 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC12.54□□□□□ -0.4
LINC00242Q5T6M2 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC12.54□□□□□ -0.4
LINC00242Q5T6M2 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC12.54□□□□□ -0.4
LINC00242Q5T6M2 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC12.54□□□□□ -0.4
LINC00242Q5T6M2 AC008403.3-201ENST00000598924 454 ntBASIC12.54□□□□□ -0.4
LINC00242Q5T6M2 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC12.54□□□□□ -0.4
LINC00242Q5T6M2 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC12.54□□□□□ -0.4
LINC00242Q5T6M2 GAMT-205ENST00000640762 751 ntTSL 5 BASIC12.54□□□□□ -0.4
LINC00242Q5T6M2 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00242Q5T6M2 AC080080.1-201ENST00000625121 2420 ntBASIC12.54□□□□□ -0.4
LINC00242Q5T6M2 AC006116.8-202ENST00000587620 1550 ntBASIC12.54□□□□□ -0.4
LINC00242Q5T6M2 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00242Q5T6M2 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00242Q5T6M2 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00242Q5T6M2 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00242Q5T6M2 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
LINC00242Q5T6M2 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
LINC00242Q5T6M2 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC12.54□□□□□ -0.4
LINC00242Q5T6M2 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00242Q5T6M2 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00242Q5T6M2 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00242Q5T6M2 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00242Q5T6M2 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
LINC00242Q5T6M2 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
LINC00242Q5T6M2 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC12.54□□□□□ -0.4
LINC00242Q5T6M2 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC12.54□□□□□ -0.4
LINC00242Q5T6M2 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
LINC00242Q5T6M2 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00242Q5T6M2 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC12.54□□□□□ -0.4
LINC00242Q5T6M2 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC12.53□□□□□ -0.4
LINC00242Q5T6M2 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00242Q5T6M2 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00242Q5T6M2 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00242Q5T6M2 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC12.53□□□□□ -0.4
LINC00242Q5T6M2 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
LINC00242Q5T6M2 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00242Q5T6M2 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
LINC00242Q5T6M2 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
LINC00242Q5T6M2 PP12613-201ENST00000424958 2230 ntBASIC12.53□□□□□ -0.4
LINC00242Q5T6M2 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00242Q5T6M2 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC12.53□□□□□ -0.4
LINC00242Q5T6M2 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC12.53□□□□□ -0.4
LINC00242Q5T6M2 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00242Q5T6M2 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00242Q5T6M2 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00242Q5T6M2 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00242Q5T6M2 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00242Q5T6M2 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00242Q5T6M2 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
LINC00242Q5T6M2 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00242Q5T6M2 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00242Q5T6M2 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC12.53□□□□□ -0.4
LINC00242Q5T6M2 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC12.53□□□□□ -0.4
LINC00242Q5T6M2 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
LINC00242Q5T6M2 KRT17P3-201ENST00000420566 1262 ntBASIC12.53□□□□□ -0.4
LINC00242Q5T6M2 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC12.53□□□□□ -0.4
LINC00242Q5T6M2 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC12.53□□□□□ -0.4
LINC00242Q5T6M2 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms