Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 AC243591.1-201ENST00000452967 1364 ntBASIC19.57■□□□□ 0.72
CTC1Q2NKJ3 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CTC1Q2NKJ3 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
CTC1Q2NKJ3 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CTC1Q2NKJ3 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CTC1Q2NKJ3 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CTC1Q2NKJ3 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.56■□□□□ 0.72
CTC1Q2NKJ3 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CTC1Q2NKJ3 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CTC1Q2NKJ3 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.56■□□□□ 0.72
CTC1Q2NKJ3 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CTC1Q2NKJ3 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CTC1Q2NKJ3 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CTC1Q2NKJ3 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CTC1Q2NKJ3 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CTC1Q2NKJ3 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CTC1Q2NKJ3 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.56■□□□□ 0.72
CTC1Q2NKJ3 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC19.56■□□□□ 0.72
CTC1Q2NKJ3 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC19.56■□□□□ 0.72
CTC1Q2NKJ3 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CTC1Q2NKJ3 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CTC1Q2NKJ3 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.56■□□□□ 0.72
CTC1Q2NKJ3 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CTC1Q2NKJ3 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CTC1Q2NKJ3 AL049812.1-201ENST00000432563 2267 ntBASIC19.56■□□□□ 0.72
CTC1Q2NKJ3 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CTC1Q2NKJ3 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CTC1Q2NKJ3 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CTC1Q2NKJ3 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CTC1Q2NKJ3 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.56■□□□□ 0.72
CTC1Q2NKJ3 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CTC1Q2NKJ3 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CTC1Q2NKJ3 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTC1Q2NKJ3 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTC1Q2NKJ3 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CTC1Q2NKJ3 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.55■□□□□ 0.72
CTC1Q2NKJ3 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTC1Q2NKJ3 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC19.55■□□□□ 0.72
CTC1Q2NKJ3 AF186996.4-201ENST00000467186 377 ntBASIC19.55■□□□□ 0.72
CTC1Q2NKJ3 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTC1Q2NKJ3 AC008556.1-201ENST00000610908 2040 ntBASIC19.55■□□□□ 0.72
CTC1Q2NKJ3 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.55■□□□□ 0.72
CTC1Q2NKJ3 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
CTC1Q2NKJ3 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
CTC1Q2NKJ3 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
CTC1Q2NKJ3 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTC1Q2NKJ3 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTC1Q2NKJ3 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.55■□□□□ 0.72
CTC1Q2NKJ3 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTC1Q2NKJ3 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.54■□□□□ 0.72
CTC1Q2NKJ3 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CTC1Q2NKJ3 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CTC1Q2NKJ3 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTC1Q2NKJ3 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTC1Q2NKJ3 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTC1Q2NKJ3 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTC1Q2NKJ3 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.54■□□□□ 0.72
CTC1Q2NKJ3 BX842568.4-201ENST00000421222 227 ntBASIC19.54■□□□□ 0.72
CTC1Q2NKJ3 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTC1Q2NKJ3 RPL18-209ENST00000550645 463 ntTSL 5 BASIC19.54■□□□□ 0.72
CTC1Q2NKJ3 RPL18-214ENST00000552588 559 ntTSL 3 BASIC19.54■□□□□ 0.72
CTC1Q2NKJ3 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CTC1Q2NKJ3 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.54■□□□□ 0.72
CTC1Q2NKJ3 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTC1Q2NKJ3 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTC1Q2NKJ3 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTC1Q2NKJ3 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.53■□□□□ 0.72
CTC1Q2NKJ3 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTC1Q2NKJ3 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTC1Q2NKJ3 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTC1Q2NKJ3 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CTC1Q2NKJ3 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTC1Q2NKJ3 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTC1Q2NKJ3 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.53■□□□□ 0.72
CTC1Q2NKJ3 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTC1Q2NKJ3 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CTC1Q2NKJ3 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTC1Q2NKJ3 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
CTC1Q2NKJ3 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CTC1Q2NKJ3 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CTC1Q2NKJ3 AC018712.1-201ENST00000455767 687 ntBASIC19.53■□□□□ 0.72
CTC1Q2NKJ3 AC093909.1-201ENST00000504731 1122 ntBASIC19.53■□□□□ 0.72
CTC1Q2NKJ3 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CTC1Q2NKJ3 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.53■□□□□ 0.72
CTC1Q2NKJ3 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC19.53■□□□□ 0.72
CTC1Q2NKJ3 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.53■□□□□ 0.72
CTC1Q2NKJ3 TERC-201ENST00000602385 541 ntBASIC19.53■□□□□ 0.72
CTC1Q2NKJ3 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.53■□□□□ 0.72
CTC1Q2NKJ3 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTC1Q2NKJ3 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
CTC1Q2NKJ3 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTC1Q2NKJ3 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTC1Q2NKJ3 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTC1Q2NKJ3 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
CTC1Q2NKJ3 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTC1Q2NKJ3 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CTC1Q2NKJ3 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.53■□□□□ 0.72
CTC1Q2NKJ3 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
CTC1Q2NKJ3 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CTC1Q2NKJ3 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms