Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDK7P50613 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.21■□□□□ 0.83
CDK7P50613 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.2■□□□□ 0.83
CDK7P50613 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDK7P50613 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.2■□□□□ 0.82
CDK7P50613 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CDK7P50613 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.2■□□□□ 0.82
CDK7P50613 AC112777.1-201ENST00000540175 1423 ntBASIC20.2■□□□□ 0.82
CDK7P50613 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDK7P50613 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDK7P50613 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CDK7P50613 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CDK7P50613 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.2■□□□□ 0.82
CDK7P50613 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.2■□□□□ 0.82
CDK7P50613 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDK7P50613 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
CDK7P50613 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CDK7P50613 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC20.2■□□□□ 0.82
CDK7P50613 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDK7P50613 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDK7P50613 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDK7P50613 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CDK7P50613 RPS2P28-201ENST00000314255 741 ntBASIC20.2■□□□□ 0.82
CDK7P50613 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC20.2■□□□□ 0.82
CDK7P50613 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC20.2■□□□□ 0.82
CDK7P50613 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDK7P50613 CD63-204ENST00000546939 779 ntTSL 3 BASIC20.2■□□□□ 0.82
CDK7P50613 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC20.2■□□□□ 0.82
CDK7P50613 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC20.2■□□□□ 0.82
CDK7P50613 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CDK7P50613 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDK7P50613 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.19■□□□□ 0.82
CDK7P50613 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.19■□□□□ 0.82
CDK7P50613 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDK7P50613 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDK7P50613 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
CDK7P50613 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDK7P50613 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDK7P50613 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDK7P50613 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC20.19■□□□□ 0.82
CDK7P50613 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC20.19■□□□□ 0.82
CDK7P50613 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC20.19■□□□□ 0.82
CDK7P50613 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDK7P50613 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDK7P50613 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDK7P50613 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC20.19■□□□□ 0.82
CDK7P50613 INTS4P1-201ENST00000438455 1935 ntBASIC20.19■□□□□ 0.82
CDK7P50613 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.19■□□□□ 0.82
CDK7P50613 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDK7P50613 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.18■□□□□ 0.82
CDK7P50613 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
CDK7P50613 MTMR9LP-203ENST00000426597 1545 ntBASIC20.18■□□□□ 0.82
CDK7P50613 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.18■□□□□ 0.82
CDK7P50613 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDK7P50613 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.18■□□□□ 0.82
CDK7P50613 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
CDK7P50613 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC20.18■□□□□ 0.82
CDK7P50613 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC20.18■□□□□ 0.82
CDK7P50613 AC009533.2-201ENST00000543664 586 ntBASIC20.18■□□□□ 0.82
CDK7P50613 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC20.18■□□□□ 0.82
CDK7P50613 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDK7P50613 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDK7P50613 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.18■□□□□ 0.82
CDK7P50613 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CDK7P50613 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDK7P50613 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.18■□□□□ 0.82
CDK7P50613 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.18■□□□□ 0.82
CDK7P50613 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CDK7P50613 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CDK7P50613 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDK7P50613 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CDK7P50613 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC20.17■□□□□ 0.82
CDK7P50613 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDK7P50613 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDK7P50613 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDK7P50613 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC20.17■□□□□ 0.82
CDK7P50613 PAM16-208ENST00000573553 722 ntTSL 2 BASIC20.17■□□□□ 0.82
CDK7P50613 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CDK7P50613 AC055717.3-201ENST00000622967 595 ntBASIC20.17■□□□□ 0.82
CDK7P50613 CAND2-206ENST00000626378 333 ntTSL 5 BASIC20.17■□□□□ 0.82
CDK7P50613 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
CDK7P50613 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDK7P50613 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDK7P50613 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.17■□□□□ 0.82
CDK7P50613 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
CDK7P50613 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDK7P50613 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
CDK7P50613 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
CDK7P50613 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDK7P50613 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDK7P50613 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC20.16■□□□□ 0.82
CDK7P50613 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
CDK7P50613 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDK7P50613 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDK7P50613 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
CDK7P50613 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDK7P50613 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
CDK7P50613 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDK7P50613 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
CDK7P50613 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms