Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCNFP41002 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CCNFP41002 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.43■□□□□ 0.54
CCNFP41002 SLC25A1P2-201ENST00000430693 912 ntBASIC18.43■□□□□ 0.54
CCNFP41002 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCNFP41002 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.43■□□□□ 0.54
CCNFP41002 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.43■□□□□ 0.54
CCNFP41002 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.43■□□□□ 0.54
CCNFP41002 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CCNFP41002 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.43■□□□□ 0.54
CCNFP41002 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CCNFP41002 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CCNFP41002 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCNFP41002 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCNFP41002 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
CCNFP41002 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.43■□□□□ 0.54
CCNFP41002 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CCNFP41002 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CCNFP41002 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.43■□□□□ 0.54
CCNFP41002 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCNFP41002 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCNFP41002 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
CCNFP41002 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.42■□□□□ 0.54
CCNFP41002 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCNFP41002 AL109659.2-201ENST00000606809 1674 ntBASIC18.42■□□□□ 0.54
CCNFP41002 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCNFP41002 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCNFP41002 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.42■□□□□ 0.54
CCNFP41002 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.42■□□□□ 0.54
CCNFP41002 MMP23A-201ENST00000234610 1017 ntBASIC18.42■□□□□ 0.54
CCNFP41002 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.42■□□□□ 0.54
CCNFP41002 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.42■□□□□ 0.54
CCNFP41002 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCNFP41002 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
CCNFP41002 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCNFP41002 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCNFP41002 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCNFP41002 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCNFP41002 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.42■□□□□ 0.54
CCNFP41002 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCNFP41002 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCNFP41002 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCNFP41002 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CCNFP41002 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.41■□□□□ 0.54
CCNFP41002 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.41■□□□□ 0.54
CCNFP41002 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCNFP41002 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCNFP41002 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.41■□□□□ 0.54
CCNFP41002 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.41■□□□□ 0.54
CCNFP41002 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.41■□□□□ 0.54
CCNFP41002 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.41■□□□□ 0.54
CCNFP41002 AL390955.1-201ENST00000428694 934 ntBASIC18.41■□□□□ 0.54
CCNFP41002 CCR12P-201ENST00000446203 998 ntBASIC18.41■□□□□ 0.54
CCNFP41002 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCNFP41002 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.41■□□□□ 0.54
CCNFP41002 BX088651.1-201ENST00000540551 451 ntBASIC18.41■□□□□ 0.54
CCNFP41002 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCNFP41002 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCNFP41002 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
CCNFP41002 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCNFP41002 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCNFP41002 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCNFP41002 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCNFP41002 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCNFP41002 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCNFP41002 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CCNFP41002 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCNFP41002 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCNFP41002 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCNFP41002 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
CCNFP41002 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCNFP41002 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.4■□□□□ 0.54
CCNFP41002 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCNFP41002 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
CCNFP41002 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCNFP41002 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCNFP41002 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCNFP41002 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCNFP41002 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCNFP41002 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCNFP41002 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCNFP41002 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCNFP41002 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CCNFP41002 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.4■□□□□ 0.54
CCNFP41002 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCNFP41002 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.4■□□□□ 0.54
CCNFP41002 TSPY15P-201ENST00000457163 923 ntBASIC18.4■□□□□ 0.54
CCNFP41002 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.4■□□□□ 0.54
CCNFP41002 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.4■□□□□ 0.54
CCNFP41002 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.4■□□□□ 0.54
CCNFP41002 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.4■□□□□ 0.54
CCNFP41002 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.4■□□□□ 0.54
CCNFP41002 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCNFP41002 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCNFP41002 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCNFP41002 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCNFP41002 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.4■□□□□ 0.54
CCNFP41002 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.4■□□□□ 0.54
CCNFP41002 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCNFP41002 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms