Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HADHAP40939 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HADHAP40939 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HADHAP40939 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HADHAP40939 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.55■□□□□ 0.56
HADHAP40939 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.55■□□□□ 0.56
HADHAP40939 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.55■□□□□ 0.56
HADHAP40939 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.55■□□□□ 0.56
HADHAP40939 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HADHAP40939 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HADHAP40939 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.55■□□□□ 0.56
HADHAP40939 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.55■□□□□ 0.56
HADHAP40939 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.55■□□□□ 0.56
HADHAP40939 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
HADHAP40939 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HADHAP40939 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
HADHAP40939 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
HADHAP40939 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.55■□□□□ 0.56
HADHAP40939 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.55■□□□□ 0.56
HADHAP40939 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
HADHAP40939 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
HADHAP40939 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HADHAP40939 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HADHAP40939 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HADHAP40939 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.54■□□□□ 0.56
HADHAP40939 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
HADHAP40939 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
HADHAP40939 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.54■□□□□ 0.56
HADHAP40939 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
HADHAP40939 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.54■□□□□ 0.56
HADHAP40939 AC026471.1-201ENST00000564629 3026 ntBASIC18.54■□□□□ 0.56
HADHAP40939 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HADHAP40939 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.54■□□□□ 0.56
HADHAP40939 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.54■□□□□ 0.56
HADHAP40939 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.54■□□□□ 0.56
HADHAP40939 KRT18P23-201ENST00000435622 1283 ntBASIC18.54■□□□□ 0.56
HADHAP40939 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.54■□□□□ 0.56
HADHAP40939 FAM210CP-201ENST00000445714 574 ntBASIC18.54■□□□□ 0.56
HADHAP40939 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
HADHAP40939 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.54■□□□□ 0.56
HADHAP40939 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HADHAP40939 AC133561.5-201ENST00000635547 218 ntBASIC18.54■□□□□ 0.56
HADHAP40939 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
HADHAP40939 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HADHAP40939 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HADHAP40939 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
HADHAP40939 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HADHAP40939 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HADHAP40939 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HADHAP40939 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HADHAP40939 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.53■□□□□ 0.56
HADHAP40939 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HADHAP40939 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HADHAP40939 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HADHAP40939 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HADHAP40939 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HADHAP40939 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.53■□□□□ 0.56
HADHAP40939 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
HADHAP40939 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
HADHAP40939 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HADHAP40939 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
HADHAP40939 SLC25A6P5-201ENST00000435663 894 ntBASIC18.53■□□□□ 0.56
HADHAP40939 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.53■□□□□ 0.56
HADHAP40939 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
HADHAP40939 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.53■□□□□ 0.56
HADHAP40939 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HADHAP40939 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
HADHAP40939 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.53■□□□□ 0.56
HADHAP40939 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.53■□□□□ 0.56
HADHAP40939 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.53■□□□□ 0.56
HADHAP40939 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
HADHAP40939 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.53■□□□□ 0.56
HADHAP40939 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
HADHAP40939 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HADHAP40939 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HADHAP40939 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HADHAP40939 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HADHAP40939 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HADHAP40939 AC018470.1-201ENST00000624790 3129 ntBASIC18.52■□□□□ 0.56
HADHAP40939 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HADHAP40939 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HADHAP40939 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.52■□□□□ 0.56
HADHAP40939 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HADHAP40939 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HADHAP40939 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.52■□□□□ 0.56
HADHAP40939 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
HADHAP40939 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HADHAP40939 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HADHAP40939 KRT8P50-201ENST00000562022 1438 ntBASIC18.52■□□□□ 0.56
HADHAP40939 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HADHAP40939 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
HADHAP40939 AP000523.1-201ENST00000398242 1049 ntBASIC18.52■□□□□ 0.56
HADHAP40939 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HADHAP40939 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.52■□□□□ 0.56
HADHAP40939 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HADHAP40939 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.52■□□□□ 0.56
HADHAP40939 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.52■□□□□ 0.56
HADHAP40939 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.52■□□□□ 0.56
HADHAP40939 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.52■□□□□ 0.56
HADHAP40939 NEK4P2-201ENST00000580004 1012 ntBASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms