Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
KRT9P35527 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KRT9P35527 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
KRT9P35527 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KRT9P35527 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
KRT9P35527 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
KRT9P35527 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
KRT9P35527 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KRT9P35527 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC20.07■□□□□ 0.8
KRT9P35527 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KRT9P35527 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KRT9P35527 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
KRT9P35527 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.07■□□□□ 0.8
KRT9P35527 MFAP1P1-201ENST00000442257 1255 ntBASIC20.07■□□□□ 0.8
KRT9P35527 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.07■□□□□ 0.8
KRT9P35527 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.07■□□□□ 0.8
KRT9P35527 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.07■□□□□ 0.8
KRT9P35527 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.07■□□□□ 0.8
KRT9P35527 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.07■□□□□ 0.8
KRT9P35527 MIR4785-201ENST00000585005 73 ntBASIC20.07■□□□□ 0.8
KRT9P35527 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.07■□□□□ 0.8
KRT9P35527 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.07■□□□□ 0.8
KRT9P35527 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
KRT9P35527 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
KRT9P35527 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KRT9P35527 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC20.07■□□□□ 0.8
KRT9P35527 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
KRT9P35527 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
KRT9P35527 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KRT9P35527 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
KRT9P35527 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC20.06■□□□□ 0.8
KRT9P35527 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
KRT9P35527 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
KRT9P35527 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KRT9P35527 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KRT9P35527 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KRT9P35527 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC20.06■□□□□ 0.8
KRT9P35527 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
KRT9P35527 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
KRT9P35527 ENSA-205ENST00000361532 792 ntTSL 2 BASIC20.06■□□□□ 0.8
KRT9P35527 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.06■□□□□ 0.8
KRT9P35527 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.06■□□□□ 0.8
KRT9P35527 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
KRT9P35527 CRYGFP-201ENST00000418459 633 ntBASIC20.06■□□□□ 0.8
KRT9P35527 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.06■□□□□ 0.8
KRT9P35527 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KRT9P35527 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.06■□□□□ 0.8
KRT9P35527 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
KRT9P35527 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
KRT9P35527 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KRT9P35527 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KRT9P35527 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
KRT9P35527 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KRT9P35527 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
KRT9P35527 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC20.05■□□□□ 0.8
KRT9P35527 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC20.05■□□□□ 0.8
KRT9P35527 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KRT9P35527 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC20.05■□□□□ 0.8
KRT9P35527 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KRT9P35527 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
KRT9P35527 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
KRT9P35527 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
KRT9P35527 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
KRT9P35527 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
KRT9P35527 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.05■□□□□ 0.8
KRT9P35527 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.05■□□□□ 0.8
KRT9P35527 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.05■□□□□ 0.8
KRT9P35527 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.05■□□□□ 0.8
KRT9P35527 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.05■□□□□ 0.8
KRT9P35527 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC20.05■□□□□ 0.8
KRT9P35527 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
KRT9P35527 GNE-204ENST00000539208 2190 ntTSL 2 BASIC20.05■□□□□ 0.8
KRT9P35527 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC20.05■□□□□ 0.8
KRT9P35527 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KRT9P35527 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.05■□□□□ 0.8
KRT9P35527 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KRT9P35527 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
KRT9P35527 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.05■□□□□ 0.8
KRT9P35527 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC20.04■□□□□ 0.8
KRT9P35527 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRT9P35527 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
KRT9P35527 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
KRT9P35527 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC20.04■□□□□ 0.8
KRT9P35527 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC20.04■□□□□ 0.8
KRT9P35527 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC20.04■□□□□ 0.8
KRT9P35527 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20.04■□□□□ 0.8
KRT9P35527 UNC93B2-201ENST00000285383 730 ntBASIC20.04■□□□□ 0.8
KRT9P35527 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRT9P35527 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
KRT9P35527 SNORA78-201ENST00000459373 127 ntBASIC20.04■□□□□ 0.8
KRT9P35527 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.04■□□□□ 0.8
KRT9P35527 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.04■□□□□ 0.8
KRT9P35527 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
KRT9P35527 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.04■□□□□ 0.8
KRT9P35527 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
KRT9P35527 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRT9P35527 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRT9P35527 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC20.04■□□□□ 0.8
KRT9P35527 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRT9P35527 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms